RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 WDR64B1ANS9 1081 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ZNF862O60290 1169 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 LPXNO60711 386 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PPFIA4O75335 1185 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 EIF3JO75822 258 aaKnown RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MED26O95402 600 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 FGAP02671 866 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 AMHP03971 560 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MMP3P08254 477 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 CKBP12277 381 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 LIG1P18858 919 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MX1P20591 662 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PTGS1P23219 599 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ASPAP45381 313 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 COL19A1Q14993 1142 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MCMDC2Q4G0Z9 681 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 TSHZ3Q63HK5 1081 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 KRT40Q6A162 431 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 SLC30A10Q6XR72 485 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 SEPT14Q6ZU15 432 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 IQCA1Q86XH1 822 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 DGKHQ86XP1 1220 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 FAM178BQ8IXR5 827 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 DHX37Q8IY37 1157 aaKnown RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PI4K2BQ8TCG2 481 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 AFG1LQ8WV93 481 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ESR2Q92731 530 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MRPL38Q96DV4 380 aaKnown RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 RMDN3Q96TC7 470 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 GTF2IRD1Q9UHL9 959 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 PPM1HQ9ULR3 514 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 AP4E1Q9UPM8 1137 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 MRPL11Q9Y3B7 192 aaKnown RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 DDX49Q9Y6V7 483 aaKnown RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 LAMA4Q16363 1823 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 ZMYM6O95789 1325 aa6.19□□□□□ -1.42
SNHG1-207ENST00000537965 FRMPD2Q68DX3 1309 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-207ENST00000537965 LINC01553A4QN01 128 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 KIAA1324LA8MWY0 1029 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-207ENST00000537965 CAND2O75155 1236 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 F13BP05160 661 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 NFICP08651 508 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 SLFN14P0C7P3 912 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 SNHG28P0DPA3 235 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 TGFB3P10600 412 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 HSPD1P10809 573 aaKnown RBP6.18□□□□□ -1.42
SNHG1-207ENST00000537965 GNAT1P11488 350 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 NME2P22392 152 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 KCNA5P22460 613 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 ARNTP27540 789 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 GRIK1P39086 918 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 ARHGAP1Q07960 439 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 MAP7Q14244 749 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 LY6KQ17RY6 165 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 KIAA0753Q2KHM9 967 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 USH1GQ495M9 461 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 TIGD5Q53EQ6 642 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 ASPRV1Q53RT3 343 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 CHST3Q7LGC8 479 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 SULF2Q8IWU5 870 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 GIMAP7Q8NHV1 300 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 PPTC7Q8NI37 304 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 STK35Q8TDR2 534 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 GDPD5Q8WTR4 605 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 COPS5Q92905 334 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 FRMD6Q96NE9 622 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 ALG1Q9BT22 464 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 CEP44Q9C0F1 390 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 SEMA6CQ9H3T2 930 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 INCENPQ9NQS7 918 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 PCMTD2Q9NV79 361 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 CRIM1Q9NZV1 1036 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 HDAC6Q9UBN7 1215 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 C5orf42Q9H799 3197 aa6.18□□□□□ -1.42
SNHG1-207ENST00000537965 ATG2AQ2TAZ0 1938 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 LCHNA4D1U4 455 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 RSPH10B2B2RC85 870 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 HAS3O00219 553 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 ZNF213O14771 459 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 TMPRSS2O15393 492 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 DCXO43602 365 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 DHX16O60231 1041 aaKnown RBP6.17□□□□□ -1.42
SNHG1-207ENST00000537965 NBNO60934 754 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 ARIH2O95376 493 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 F2P00734 622 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 RSPH10BP0C881 870 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 DEFB103AP81534 67 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 CDC37Q16543 378 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-207ENST00000537965 CPSF6Q16630 551 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNHG1-207ENST00000537965 ZNF618Q5T7W0 954 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 MYOCDQ8IZQ8 938 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 SYTL5Q8TDW5 730 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-207ENST00000537965 SEPT8Q92599 483 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 KAT2BQ92831 832 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 APBB2Q92870 758 aa6.17□□□□□ -1.42
SNHG1-207ENST00000537965 PABPC5Q96DU9 382 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms