RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DCDC2Q9UHG0 476 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 F5P12259 2224 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 MAGI1Q96QZ7 1491 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 FKBP3Q00688 224 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CYP4A11Q02928 519 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DMP1Q13316 513 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 KLHL38Q2WGJ6 581 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ARMC3Q5W041 872 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NOP9Q86U38 636 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CCDC60Q8IWA6 550 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 AGR3Q8TD06 166 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ZKSCAN4Q969J2 545 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 AIFM3Q96NN9 605 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 GINS4Q9BRT9 223 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 SPDYE16A6NNV3 312 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PIK3R2O00459 728 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CASP5P51878 434 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PLIN5Q00G26 463 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 SPDYE2Q495Y8 402 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 IZUMO3Q5VZ72 239 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NCAPG2Q86XI2 1143 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DEPDC7Q96QD5 511 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TRAPPC8Q9Y2L5 1435 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 IVNS1ABPQ9Y6Y0 642 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TDRD6O60522 2096 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TSPOAP1O95153 1857 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 F8VZ95 297 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 KRT38O76015 456 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PSMC3P17980 439 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PSMA2P25787 234 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 C21orf59P57076 290 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 GDPD5Q8WTR4 605 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ACAP3Q96P50 834 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 OSBPL8Q9BZF1 889 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NACA2Q9H009 215 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 STAP2Q9UGK3 403 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 RWDD3Q9Y3V2 267 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TTC26A0AVF1 554 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 EYA2O00167 538 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CCDC81Q6ZN84 652 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TNIP2Q8NFZ5 429 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HSPH1Q92598 858 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TMEM245Q9H330 911 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NOL6Q9H6R4 1146 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 RUBCNLQ9H714 662 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DNALI1O14645 258 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PFDN6O15212 129 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TJP3O95049 919 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC63Q05C16 580 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PPP2R5BQ15173 497 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HEMGNQ9BXL5 484 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ICA1Q05084 483 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF589Q86UQ0 364 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 WDR60Q8WVS4 1066 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DCLRE1BQ9H816 532 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 AMACRQ9UHK6 382 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HAO1Q9UJM8 370 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PCDHB6Q9Y5E3 794 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 MAST1Q9Y2H9 1570 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TAF5LO75529 589 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HADHAP40939 763 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 EAPPQ56P03 285 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 WLSQ5T9L3 541 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CLEC17AQ6ZS10 378 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DIS3Q9Y2L1 958 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 FRMPD2Q68DX3 1309 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CDC27P30260 824 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 KCNJ6P48051 423 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PDIA2Q13087 525 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 AOC3Q16853 763 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TMEM63BQ5T3F8 832 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 C16orf89Q6UX73 402 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TMC4Q7Z404 712 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HNRNPLLQ8WVV9 542 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TEX12Q9BXU0 123 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 IL1RL2Q9HB29 575 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HACD3Q9P035 362 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 GINS2Q9Y248 185 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 KLHL20Q9Y2M5 609 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC53A6NM62 1247 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NEMP1O14524 444 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ALDH5A1P51649 535 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 NLRP11P59045 1033 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 RASGRP2Q7LDG7 609 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 GLMNQ92990 594 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 LENG1Q96BZ8 264 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 TRAPPC9Q96Q05 1148 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ZCWPW1Q9H0M4 648 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 FAM96AQ9H5X1 160 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ANAPC7Q9UJX3 599 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CORO1CQ9ULV4 474 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF18P17022 549 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HMOX2P30519 316 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 RNF135Q8IUD6 432 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CHP1Q99653 195 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PAIP1Q9H074 479 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ADAMTS1Q9UHI8 967 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 V9GYQ6 96 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 ADGRA3Q8IWK6 1321 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms