RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 MIEF2Q96C03 454 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 ELAC2Q9BQ52 826 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 O00370 1275 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 SNX3O60493 162 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 ALADP13716 330 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 NMT1P30419 496 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 COPB2P35606 906 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 GPC5P78333 572 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 IFI35P80217 286 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 KCNA1Q09470 495 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 BFSP1Q12934 665 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF268Q14587 947 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 E2F5Q15329 346 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 AOC3Q16853 763 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 ABCB5Q2M3G0 1257 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 C1orf186Q6ZWK4 172 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 ADAT2Q7Z6V5 191 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
CPSF7-218ENST00000537641 TAS2R14Q9NYV8 317 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 BAIAP2L1Q9UHR4 511 aa13.07□□□□□ -0.32
CPSF7-218ENST00000537641 RTN2O75298 545 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 NQO1P15559 274 aaKnown RBP13.06□□□□□ -0.32
CPSF7-218ENST00000537641 COILP38432 576 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-218ENST00000537641 PEX5P50542 639 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
CPSF7-218ENST00000537641 CYP4A11Q02928 519 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 SIAH1Q8IUQ4 282 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 SYNPO2Q9UMS6 1093 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-218ENST00000537641 MYH11P35749 1972 aa13.06□□□□□ -0.32
CPSF7-218ENST00000537641 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 RAD21O60216 631 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 SUN1O94901 812 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 CHRNA5P30532 468 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 NCALDP61601 193 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 ARHGAP44Q17R89 818 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 GALNTL6Q49A17 601 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF720Q7Z2F6 126 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 SLC13A5Q86YT5 568 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 LMO3Q8TAP4 145 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 KRT35Q92764 455 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 CD101Q93033 1021 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 MOV10L1Q9BXT6 1211 aaKnown RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 WHRNQ9P202 907 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 F5H6K3 240 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 EML1O00423 815 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 TRIM49P0CI25 452 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 TRIM49CP0CI26 452 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 GZMAP12544 262 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 FGFR4P22455 802 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 LMNB2Q03252 620 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 CETN1Q12798 172 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 EXOC3L1Q86VI1 746 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 PALB2Q86YC2 1186 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 TMEM174Q8WUU8 243 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
CPSF7-218ENST00000537641 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
CPSF7-218ENST00000537641 PIK3CDO00329 1044 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms