RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KCNJ18B7U540 433 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 ARF4P18085 180 aaPredicted RBP17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 TLE2Q04725 743 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 KCNJ12Q14500 433 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM187BQ17R55 369 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 LRRC26Q2I0M4 334 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 ATF7IP2Q5U623 682 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM228AQ86W67 206 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 M0QZ92 97 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 GHRP10912 638 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 SCP2P22307 547 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 ABCD1P33897 745 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 CDC42EP1Q00587 391 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 MBTPS1Q14703 1052 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 NFIL3Q16649 462 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 APTXQ7Z2E3 356 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 C12orf56Q8IXR9 622 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 GOLGA5Q8TBA6 731 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TAB2Q9NYJ8 693 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 A0A0B4J269 797 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 CETN3O15182 167 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 EXOC3O60645 756 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 ERLIN2O94905 339 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 ADRB2P07550 413 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 PROZP22891 400 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 MRE11P49959 708 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TPM4P67936 248 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 FANCCQ00597 558 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 FAAP100Q0VG06 881 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 KRT31Q15323 416 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 CBWD2Q8IUF1 395 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 SLC9A9Q8IVB4 645 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 CEP63Q96MT8 703 aa17.11■□□□□ 0.33
SFSWAP-206ENST00000537582 TOM1L1O75674 476 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 LPIN1Q14693 890 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 FBXO47Q5MNV8 452 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 FILIP1Q7Z7B0 1213 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 CEP120Q8N960 986 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 NAP1L5Q96NT1 182 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 CDT1Q9H211 546 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 TNFSF13BQ9Y275 285 aa17.1■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM189A1O60320 539 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 GARTP22102 1010 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 CD52P31358 61 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 TNFSF9P41273 254 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 ACOT2P49753 483 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 CCDC40Q4G0X9 1142 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 XXYLT1Q8NBI6 393 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 BORCS6Q96GS4 357 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 SEZ6LQ9BYH1 1024 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 INTS13Q9NVM9 706 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 ST3GAL5Q9UNP4 418 aa17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 PIN4Q9Y237 131 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-206ENST00000537582 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 CLDN3O15551 220 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 RPS6KA5O75582 802 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 WNT7BP56706 349 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 SNRPFP62306 86 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 MCL1Q07820 350 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 CRELD2Q6UXH1 353 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms