RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PPP4R3CPQ6ZMV5 832 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TBC1D16Q8TBP0 767 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 GINM1Q9NU53 330 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SCHIP1Q9P0W5 487 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLIT3O75094 1523 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 DDX39AO00148 427 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PRKAB2O43741 272 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 LRRN2O75325 713 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 HLA-DOAP06340 250 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 MYL7Q01449 175 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TBCCQ15814 346 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC14Q49A88 953 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 RSPH3Q86UC2 560 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLF2Q8IX21 1173 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLC17A8Q8NDX2 589 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLC26A7Q8TE54 656 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ADAM33Q9BZ11 813 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 LACRTQ9GZZ8 138 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ALG13Q9NP73 1137 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PCDHA4Q9UN74 947 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SMG5Q9UPR3 1016 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SH3GLB1Q9Y371 365 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SGK1O00141 431 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 WDR46O15213 610 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 DDAH1O94760 285 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 FAM200BP0CF97 657 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 KLK7P49862 253 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLC18A3Q16572 532 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SYDE1Q6ZW31 735 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CNBD1Q8NA66 436 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 FNBP1Q96RU3 617 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CCSER1Q9C0I3 900 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 DISC1Q9NRI5 854 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 AGPAT5Q9NUQ2 364 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 MYH8P13535 1937 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 KDM1AO60341 852 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ATRNO75882 1429 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 LINGO3P0C6S8 592 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SP100P23497 879 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CYFIP1Q7L576 1253 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 HAPLN3Q96S86 360 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TSPAN18Q96SJ8 248 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PTTG2Q9NZH5 202 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ADAM22Q9P0K1 906 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 RTCBQ9Y3I0 505 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ATP9BO43861 1147 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ASPHQ12797 758 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 GALNTL6Q49A17 601 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 NSMFQ6X4W1 530 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CYB5R4Q7L1T6 521 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 FAM186BQ8IYM0 893 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TRPC4APQ8TEL6 797 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC68Q9H2F9 335 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 C1orf167Q5SNV9 1468 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PVALEFA0A1B0GWK0 134 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ZCCHC18P0CG32 403 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MCF2P10911 925 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PGM1P36871 562 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MEI1Q5TIA1 1274 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PRCCQ92733 491 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ZFRQ96KR1 1074 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF570Q96NI8 536 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PALMDQ9NP74 551 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 GCNT4Q9P109 453 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CLIC2O15247 247 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TARSP26639 723 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CYTH1Q15438 398 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 INAQ16352 499 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ACCSLQ4AC99 568 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 RASSF3Q86WH2 238 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PPM1KQ8N3J5 372 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MAGEB18Q96M61 343 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 KCNMB3Q9NPA1 279 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 TJP3O95049 919 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 GLI1P08151 1106 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 VCAM1P19320 739 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 EEF1B2P24534 225 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ATICP31939 592 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 HP1BP3Q5SSJ5 553 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 WDR59Q6PJI9 974 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ANKS1AQ92625 1134 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ATP2A3Q93084 1043 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CFAP36Q96G28 342 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MXD3Q9BW11 206 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SH3GLB2Q9NR46 395 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 GALNT8Q9NY28 637 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MAD1L1Q9Y6D9 718 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 PLEKHA8P1O95397 391 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 A1BGP04217 495 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 DLATP10515 647 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 DCTN2Q13561 401 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SRBD1Q8N5C6 995 aaKnown RBP5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ICA1LQ8NDH6 482 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 CATSPER1Q8NEC5 780 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 SUPT20HQ8NEM7 779 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 DDI1Q8WTU0 396 aa5.74□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF184Q99676 751 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms