RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 HSD3B2P26439 372 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 TCEA2Q15560 299 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 LEXMQ3ZCV2 418 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 FAM209AQ5JX71 171 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 FOXB2Q5VYV0 432 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 MPZL3Q6UWV2 235 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 ADSSL1Q8N142 457 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 ABHD4Q8TB40 342 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 SOCS4Q8WXH5 440 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 TMEM39BQ9GZU3 492 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 MTIF3Q9H2K0 278 aaKnown RBP8.18□□□□□ -1.1
CCDC60-203ENST00000536742 TMX1Q9H3N1 280 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 SP110Q9HB58 689 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
CCDC60-203ENST00000536742 ARAP2Q8WZ64 1704 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 A0A1W2PQ27 194 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 A0A1W2PQ64 194 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 A0A1W2PQC6 194 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 A0A1W2PQD8 194 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 KBTBD13C9JR72 458 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 AQP7O14520 342 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 PLD2O14939 933 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 CLSTN1O94985 981 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 NBL1P41271 181 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 TLE2Q04725 743 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 ZNF124Q15973 351 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 MLANAQ16655 118 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 FNDC3BQ53EP0 1204 aaKnown RBP8.17□□□□□ -1.1
CCDC60-203ENST00000536742 TRIM61Q5EBN2 209 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 SDE2Q6IQ49 451 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 FAM84AQ96KN4 292 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 JMJD8Q96S16 334 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
CCDC60-203ENST00000536742 TIMM13Q9Y5L4 95 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-203ENST00000536742 ZNF521Q96K83 1311 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 CACNA1HO95180 2353 aa8.17□□□□□ -1.1
CCDC60-203ENST00000536742 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 RFPL3O75679 317 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 HSP90B1P14625 803 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 PNLIPP16233 465 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 ARL4AP40617 200 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 MAP1BP46821 2468 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 GCLCP48506 637 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 RPL11P62913 178 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 PPIGQ13427 754 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 PRSS53Q2L4Q9 553 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 TMEM240Q5SV17 173 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 FYB2Q5VWT5 728 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 PSRC1Q6PGN9 363 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 USP53Q70EK8 1073 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 NLRX1Q86UT6 975 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 NKD2Q969F2 451 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 ZNF341Q9BYN7 854 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 NCOA5Q9HCD5 579 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 YBX2Q9Y2T7 364 aaKnown RBP8.16□□□□□ -1.1
CCDC60-203ENST00000536742 MAST4O15021 2626 aa8.16□□□□□ -1.1
CCDC60-203ENST00000536742 AOX1Q06278 1338 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 FLNBO75369 2602 aaKnown RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 A0A0G2JLL6 359 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 ESYT3A0FGR9 886 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 C7orf72A4D263 438 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 ZNF503-AS2A6NEH8 195 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 NOTOA8MTQ0 251 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 F8W031 263 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 H0Y858 1186 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 GLI1P08151 1106 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 GPR85P60893 370 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 JAG1P78504 1218 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 NTRK3Q16288 839 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 PLEKHG4Q58EX7 1191 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 PRRT2Q7Z6L0 340 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 IFNL3Q8IZI9 196 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 SLC44A5Q8NCS7 719 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 EDAQ92838 391 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 LIN37Q96GY3 246 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 FEZ1Q99689 392 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 TDRD3Q9H7E2 651 aaKnown RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
CCDC60-203ENST00000536742 TLR9Q9NR96 1032 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 FANCLQ9NW38 375 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
CCDC60-203ENST00000536742 USP24Q9UPU5 2620 aa8.14□□□□□ -1.11
CCDC60-203ENST00000536742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-203ENST00000536742 TIMP1P01033 207 aa8.14□□□□□ -1.11
CCDC60-203ENST00000536742 C6orf222P0C671 652 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-203ENST00000536742 IL9P15248 144 aa8.14□□□□□ -1.11
CCDC60-203ENST00000536742 CCT4P50991 539 aaKnown RBP8.14□□□□□ -1.11
CCDC60-203ENST00000536742 HERC4Q5GLZ8 1057 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-203ENST00000536742 GJC2Q5T442 439 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-203ENST00000536742 MFSD5Q6N075 450 aa8.14□□□□□ -1.11
CCDC60-203ENST00000536742 GADL1Q6ZQY3 521 aa8.14□□□□□ -1.11
CCDC60-203ENST00000536742 CABP7Q86V35 215 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms