RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SFMBT1Q9UHJ3 866 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 PCDHA10Q9Y5I2 948 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 DFFAO00273 331 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 TADA3O75528 432 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 TOB2Q14106 344 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 DUOXA2Q1HG44 320 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 RAPGEF5Q92565 580 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 TRPV6Q9H1D0 765 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 ZFXP17010 805 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 CCDC195A0A1B0GUA6 201 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 CDK17Q00537 523 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 RBBP7Q16576 425 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 SP8Q8IXZ3 490 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 RAB42Q8N4Z0 105 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 TNIP3Q96KP6 325 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 GYG2O15488 501 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 FTLP02792 175 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 IGKV5-2P06315 115 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 LCP1P13796 627 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 EFNA5P52803 228 aa19.28■□□□□ 0.68
SFSWAP-203ENST00000535236 CYBBP04839 570 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF746Q6NUN9 644 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 A0A087WUV0 522 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF197O14709 1029 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 GPS1Q13098 491 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 RHOT1Q8IXI2 618 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 MTA3Q9BTC8 594 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 TMEM106CQ9BVX2 250 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 OVOS2A0A0G2JMS6 1433 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 OVOS2A0A0J9YW53 1432 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 OVOS2Q6IE36 1432 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 TRAPPC3O43617 180 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 GUCY2CP25092 1073 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 CLCN6P51797 869 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 HMGCS2P54868 508 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF467Q7Z7K2 595 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 SPATA2LQ8IUW3 424 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 MTBPQ96DY7 904 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ASPSCR1Q9BZE9 553 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 PIN4Q9Y237 131 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 GRIK1P39086 918 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 USP11P51784 963 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF211Q13398 564 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 ANO4Q32M45 955 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 LRRC37BQ96QE4 947 aa19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 CHCHD3Q9NX63 227 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-203ENST00000535236 PRPF4O43172 522 aaKnown RBP eCLIP19.27■□□□□ 0.679e-7■■■□□ 15.4
SFSWAP-203ENST00000535236 CACNB2Q08289 660 aaPredicted RBP19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 FAM47EQ6ZV65 393 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 TADA2BQ86TJ2 420 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 LDHDQ86WU2 507 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 EFHBQ8N7U6 833 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 MORC4Q8TE76 937 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 PPP2R3CQ969Q6 453 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 CENPKQ9BS16 269 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 ELP3Q9H9T3 547 aa19.27■□□□□ 0.67
SFSWAP-203ENST00000535236 KCNJ6P48051 423 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 EFTUD2Q15029 972 aaKnown RBP eCLIP19.26■□□□□ 0.672e-10■■□□□ 12.8
SFSWAP-203ENST00000535236 ZC3H12BQ5HYM0 836 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 TEDDM1Q5T9Z0 273 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 KIF17Q9P2E2 1029 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 CFAP69A5D8W1 941 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 MCF2P10911 925 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 PMS2P54278 862 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 TAP1Q03518 808 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 EPHA7Q15375 998 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 SRGAP2O75044 1071 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 OCM2P0CE71 109 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 OCMP0CE72 109 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 RNF149Q8NC42 400 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 SYCE1LA8MT33 242 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 KRT14P02533 472 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 PDIA2Q13087 525 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 ING2Q9H160 280 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 MTIF3Q9H2K0 278 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 JPH1Q9HDC5 661 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 ZFP69BQ9UJL9 534 aa19.26■□□□□ 0.67
SFSWAP-203ENST00000535236 TDP2O95551 362 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 LMNAP02545 664 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 AARSP49588 968 aaKnown RBP eCLIP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 STAT5BP51692 787 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 VCPP55072 806 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 ZBTB17Q13105 803 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 TBC1D1Q86TI0 1168 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 RNF135Q8IUD6 432 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 WNT8AQ9H1J5 351 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 SMYD3Q9H7B4 428 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 PARVAQ9NVD7 372 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 PRKCBP05771 671 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 MB21D2Q8IYB1 491 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 ST13P4Q8IZP2 240 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 EXOC4Q96A65 974 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 DCUN1D1Q96GG9 259 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 ZNF189O75820 626 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms