RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 SLC4A4Q9Y6R1 1079 aa6.73□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NHSQ6T4R5 1651 aa6.73□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TNRC6CQ9HCJ0 1690 aaKnown RBP6.73□□□□□ -1.33
TNFRSF1A-206ENST00000535038 BTAF1O14981 1849 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 BTBD18B2RXH4 712 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PRPF3O43395 683 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 APPP05067 770 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SKILP12757 684 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 VAV1P15498 845 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 FANCCQ00597 558 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MYL5Q02045 173 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GRIN1Q05586 938 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TROAPQ12815 778 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MORC3Q14149 939 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 WTAPQ15007 396 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DDB1Q16531 1140 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 VMACQ2NL98 169 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CCDC93Q567U6 631 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CT47A1Q5JQC4 288 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DNTTIP2Q5QJE6 756 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TMEM139Q8IV31 216 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IGDCC3Q8IVU1 814 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 VSTM4Q8IW00 320 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SP8Q8IXZ3 490 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DRC7Q8IY82 874 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DIS3L2Q8IYB7 885 aaKnown RBP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ZNF654Q8IZM8 581 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 FANCBQ8NB91 859 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CXorf38Q8TB03 319 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DPF2Q92785 391 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NKD1Q969G9 470 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 FAM84BQ96KN1 310 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MPHOSPH8Q99549 860 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PHF20Q9BVI0 1012 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SLC26A6Q9BXS9 759 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NACAP1Q9BZK3 213 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 AATFQ9NY61 560 aaKnown RBP eCLIP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IFNKQ9P0W0 207 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MAN1B1Q9UKM7 699 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NIP7Q9Y221 180 aaKnown RBP eCLIP6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CDK5RAP2Q96SN8 1893 aa6.72□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SMIM22K7EJ46 135 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TUBB4AP04350 444 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 GSNP06396 782 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ATP1A3P13637 1013 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 NT5C2P49902 561 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PNOCQ13519 176 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TPD52L1Q16890 204 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SBK1Q52WX2 424 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 APTXQ7Z2E3 356 aaKnown RBP6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SLITRK4Q8IW52 837 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ENAHQ8N8S7 591 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TRIML1Q8N9V2 468 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 FEZF2Q8TBJ5 459 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ANKS1AQ92625 1134 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PPP1R13BQ96KQ4 1090 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 C16orf45Q96MC5 204 aaPredicted RBP6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SLC9A7Q96T83 725 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PCDHB6Q9Y5E3 794 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PCDHA5Q9Y5H7 936 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TNKSO95271 1327 aa6.71□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ROBO3Q96MS0 1386 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 FOXN1O15353 648 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 DDAH1O94760 285 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TM4SF1P30408 202 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PBX1P40424 430 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TDO2P48775 406 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 CHAF1AQ13111 956 aaPredicted RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TRIM29Q14134 588 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SART3Q15020 963 aaKnown RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PTPN14Q15678 1187 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 EARS2Q5JPH6 523 aaKnown RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 CTR9Q6PD62 1173 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TRIM65Q6PJ69 517 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 RPTNQ6XPR3 784 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 TMTC3Q6ZXV5 915 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 REXO1L1PQ8IX06 675 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SMAP1Q8IYB5 467 aaPredicted RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 NAT16Q8N8M0 369 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 MIGA1Q8NAN2 632 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 MLKLQ8NB16 471 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ESR2Q92731 530 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 NSUN4Q96CB9 384 aaKnown RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 EAF1Q96JC9 268 aaPredicted RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 DHRS1Q96LJ7 313 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 PWWP2AQ96N64 755 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 JMJD8Q96S16 334 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 SUCOQ9UBS9 1254 aaKnown RBP6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 KCNJ14Q9UNX9 436 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 ZNF652Q9Y2D9 606 aa6.7□□□□□ -1.34
TNFRSF1A-206ENST00000535038 FOCADQ5VW36 1801 aa6.69□□□□□ -1.34
TNFRSF1A-206ENST00000535038 NAV1Q8NEY1 1877 aa6.69□□□□□ -1.34
TNFRSF1A-206ENST00000535038 A0A087X0B3 334 aa6.69□□□□□ -1.34
TNFRSF1A-206ENST00000535038 A0A1W2PQC6 194 aa6.69□□□□□ -1.34
TNFRSF1A-206ENST00000535038 FAM86C2PA6NEL3 165 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms