RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	CYP2R1	Q6VVX0	501 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	CCDC81	Q6ZN84	652 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	CCAR1	Q8IX12	1150 aa	Known RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	TEX11	Q8IYF3	940 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	FIBCD1	Q8N539	461 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	TRPV1	Q8NER1	839 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	EDC3	Q96F86	508 aa	Known RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	PAGR1	Q9BTK6	254 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	SLC12A9	Q9BXP2	914 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	PDLIM7	Q9NR12	457 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	IMPACT	Q9P2X3	320 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	ACSL6	Q9UKU0	697 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	ZNF214	Q9UL59	606 aa	Predicted RBP	7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	EFR3B	Q9Y2G0	817 aa		7.39	□□□□□ -1.23
PICALM-223	ENST00000534412	ZNF236	Q9UL36	1845 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	CHD9	Q3L8U1	2897 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	NUDT19	A8MXV4	375 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	N4BP3	O15049	544 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	IGSF3	O75054	1194 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	CYP2C19	P33261	490 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	TFCP2	Q12800	502 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	MTX1	Q13505	466 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	ALDH1L2	Q3SY69	923 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	RTP2	Q5QGT7	225 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	SLC39A5	Q6ZMH5	540 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	JMJD8	Q96S16	334 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	NOL6	Q9H6R4	1146 aa	Known RBP	7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	HDAC5	Q9UQL6	1122 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	ATP11B	Q9Y2G3	1177 aa		7.38	□□□□□ -1.23
PICALM-223	ENST00000534412	ROBO3	Q96MS0	1386 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	TRIM43B	A6NCK2	446 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	SEPT4	O43236	478 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	BAG3	O95817	575 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	VCAM1	P19320	739 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	MCAM	P43121	646 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	KIR3DS1	Q14943	382 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	GNPTAB	Q3T906	1256 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	TRIM60	Q495X7	471 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	TATDN1	Q6P1N9	297 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	LILRA6	Q6PI73	481 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	CATSPERG	Q6ZRH7	1159 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	TMC6	Q7Z403	805 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	ADGRA1	Q86SQ6	560 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	USP38	Q8NB14	1042 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	ARRDC4	Q8NCT1	418 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	OR6P1	Q8NGX9	317 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	NPLOC4	Q8TAT6	608 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	BAD	Q92934	168 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	GPRASP2	Q96D09	838 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	KIAA1683	Q9H0B3	1180 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	GBP3	Q9H0R5	595 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	CNTD2	Q9H8S5	307 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	RAI14	Q9P0K7	980 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	BTBD7	Q9P203	1132 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	RAPGEFL1	Q9UHV5	662 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	ZNF451	Q9Y4E5	1061 aa		7.37	□□□□□ -1.23
PICALM-223	ENST00000534412	BDP1	A6H8Y1	2624 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	KBTBD13	C9JR72	458 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412		E9PSI1	815 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	GH2	P01242	217 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	CD3E	P07766	207 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	INHBB	P09529	407 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	PI3	P19957	117 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	ITGB8	P26012	769 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	CNGA1	P29973	690 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	SOX9	P48436	509 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	USP14	P54578	494 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	SSPN	Q14714	243 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	NR1I3	Q14994	352 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	GJC2	Q5T442	439 aa	Predicted RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	HEATR6	Q6AI08	1181 aa	Known RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	ATF7IP	Q6VMQ6	1270 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	TTLL10	Q6ZVT0	673 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	ADAT2	Q7Z6V5	191 aa	Known RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	MAPKAPK5	Q8IW41	473 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	TMEM52	Q8NDY8	209 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	MZB1	Q8WU39	189 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	TGFBRAP1	Q8WUH2	860 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	CPLX3	Q8WVH0	158 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	RNPC3	Q96LT9	517 aa	Known RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	MEIS3	Q99687	375 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	SRRT	Q9BXP5	876 aa	Known RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	TNFRSF12A	Q9NP84	129 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	KLHL14	Q9P2G3	628 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	LRP2BP	Q9P2M1	347 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	PALD1	Q9ULE6	856 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	DIS3	Q9Y2L1	958 aa	Known RBP	7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	RLF	Q13129	1914 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412	CHD7	Q9P2D1	2997 aa		7.36	□□□□□ -1.23
PICALM-223	ENST00000534412		A0A0G2JMZ2	1700 aa		7.35	□□□□□ -1.23
PICALM-223	ENST00000534412	KIAA0355	O15063	1070 aa		7.35	□□□□□ -1.23
PICALM-223	ENST00000534412	FGF10	O15520	208 aa	Predicted RBP	7.35	□□□□□ -1.23
PICALM-223	ENST00000534412	SRGAP3	O43295	1099 aa		7.35	□□□□□ -1.23

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