RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 MYOGP15173 224 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 UBE2HP62256 183 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 NT5DC1Q5TFE4 455 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 ATF7IP2Q5U623 682 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 UNC13DQ70J99 1090 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 ZNF598Q86UK7 904 aaKnown RBP26.57■■□□□ 1.84
SIPA1-210ENST00000534406 CDR2LQ86X02 465 aaPredicted RBP26.57■■□□□ 1.84
SIPA1-210ENST00000534406 ENGASEQ8NFI3 743 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 LRCH3Q96II8 777 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 EIF2AQ9BY44 585 aaKnown RBP26.57■■□□□ 1.84
SIPA1-210ENST00000534406 USP20Q9Y2K6 914 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 FNDC1Q4ZHG4 1894 aaPredicted RBP26.56■■□□□ 1.84
SIPA1-210ENST00000534406 DGKIO75912 1065 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 NPTXRO95502 500 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 GTF2BQ00403 316 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 SNW1Q13573 536 aaKnown RBP26.56■■□□□ 1.84
SIPA1-210ENST00000534406 KANK3Q6NY19 840 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 APBB1IPQ7Z5R6 666 aaPredicted RBP26.56■■□□□ 1.84
SIPA1-210ENST00000534406 HVCN1Q96D96 273 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 BICD1Q96G01 975 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 NKX2-4Q9H2Z4 354 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 RC3H2Q9HBD1 1191 aaKnown RBP26.56■■□□□ 1.84
SIPA1-210ENST00000534406 TBC1D7Q9P0N9 293 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 TBX20Q9UMR3 447 aa26.56■■□□□ 1.84
SIPA1-210ENST00000534406 PVALEFA0A1B0GWK0 134 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 CA3P07451 260 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 FXR1P51114 621 aaKnown RBP eCLIP26.55■■□□□ 1.84
SIPA1-210ENST00000534406 DCAF4L1Q3SXM0 396 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 ZNF720Q7Z2F6 126 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 HACE1Q8IYU2 909 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 PGBD4Q96DM1 585 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 ACO2Q99798 780 aaKnown RBP26.55■■□□□ 1.84
SIPA1-210ENST00000534406 TARS2Q9BW92 718 aaKnown RBP26.55■■□□□ 1.84
SIPA1-210ENST00000534406 TNFSF13BQ9Y275 285 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 IPPQ9Y573 584 aa26.55■■□□□ 1.84
SIPA1-210ENST00000534406 LCHNA4D1U4 455 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 PRPF40AO75400 957 aaKnown RBP26.54■■□□□ 1.84
SIPA1-210ENST00000534406 PPP1R37O75864 691 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 GCNT3O95395 438 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 FGFR1P11362 822 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 GATMP50440 423 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 ALCAMQ13740 583 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 FAM26FQ5R3K3 315 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 EEF1DP3Q658K8 133 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 ZPBP2Q6X784 338 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 MAP4K3Q8IVH8 894 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 ABI1Q8IZP0 508 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 SP7Q8TDD2 431 aaPredicted RBP26.54■■□□□ 1.84
SIPA1-210ENST00000534406 RNF19AQ9NV58 838 aa26.54■■□□□ 1.84
SIPA1-210ENST00000534406 TMEM265A0A087WTH1 108 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 KINO60870 393 aaKnown RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 NR1I2O75469 434 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 PRR29P0C7W0 189 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 ZNF568Q3ZCX4 644 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 ZC2HC1CQ53FD0 456 aaPredicted RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 PPP2R2DQ66LE6 453 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 STXBP4Q6ZWJ1 553 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 MRPL10Q7Z7H8 261 aaKnown RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 CMTR2Q8IYT2 770 aaKnown RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 LPPQ93052 612 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 ZNF689Q96CS4 500 aaPredicted RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 TIGD1Q96MW7 591 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 NXF3Q9H4D5 531 aaKnown RBP26.53■■□□□ 1.84
SIPA1-210ENST00000534406 EXOC1Q9NV70 894 aa26.53■■□□□ 1.84
SIPA1-210ENST00000534406 CHD9Q3L8U1 2897 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 HNRNPDLO14979 420 aaKnown RBP26.52■■□□□ 1.84
SIPA1-210ENST00000534406 PIGRP01833 764 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 MYBP10242 640 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 LIG4P49917 911 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 CASP5P51878 434 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 EHHADHQ08426 723 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 BTG3Q14201 252 aaPredicted RBP26.52■■□□□ 1.84
SIPA1-210ENST00000534406 POSTNQ15063 836 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 PAN2Q504Q3 1202 aaKnown RBP26.52■■□□□ 1.84
SIPA1-210ENST00000534406 CLLU1OSQ5K130 101 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 MPZL3Q6UWV2 235 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 SMG8Q8ND04 991 aaKnown RBP26.52■■□□□ 1.84
SIPA1-210ENST00000534406 STRA6Q9BX79 667 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 TMEM117Q9H0C3 514 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 SLC28A3Q9HAS3 691 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 ANKFY1Q9P2R3 1169 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 PCDHB13Q9Y5F0 798 aa26.52■■□□□ 1.84
SIPA1-210ENST00000534406 TBKBP1A7MCY6 615 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 KLRC4O43908 158 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 TOM1L1O75674 476 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 ITGA4P13612 1032 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 PROZP22891 400 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 DPYDQ12882 1025 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 L1TD1Q5T7N2 865 aaKnown RBP26.51■■□□□ 1.83
SIPA1-210ENST00000534406 GPR153Q6NV75 609 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 GLB1LQ6UWU2 654 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 RSPH1Q8WYR4 309 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 HPS3Q969F9 1004 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 CCDC47Q96A33 483 aaKnown RBP26.51■■□□□ 1.83
SIPA1-210ENST00000534406 APOL6Q9BWW8 343 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 FGFBP2Q9BYJ0 223 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 CDT1Q9H211 546 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 PTPRHQ9HD43 1115 aa26.51■■□□□ 1.83
SIPA1-210ENST00000534406 HOOK1Q9UJC3 728 aaKnown RBP26.51■■□□□ 1.83
SIPA1-210ENST00000534406 HES2Q9Y543 173 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms