RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CARNS1A5YM72 827 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 SFI1A8K8P3 1242 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 K7ERI5 159 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 N4BP3O15049 544 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 SSBP05455 408 aaKnown RBP eCLIP23.53■■□□□ 1.36
PKP3-211ENST00000534401 ITGA4P13612 1032 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 GIT2Q14161 759 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 TIGD5Q53EQ6 642 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 FOXD4L5Q5VV16 416 aaPredicted RBP23.53■■□□□ 1.36
PKP3-211ENST00000534401 GPBP1Q86WP2 473 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 TMEM161BQ8NDZ6 487 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 FOXD4L4Q8WXT5 416 aaPredicted RBP23.53■■□□□ 1.36
PKP3-211ENST00000534401 NRDE2Q9H7Z3 1164 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 PTPRHQ9HD43 1115 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 KMT5AQ9NQR1 393 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 PRDM6Q9NQX0 595 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 KANSL3Q9P2N6 904 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 CCDC39Q9UFE4 941 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 RCOR1Q9UKL0 485 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 GIT1Q9Y2X7 761 aa23.53■■□□□ 1.36
PKP3-211ENST00000534401 A0A087X0B3 334 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 NPHP3-ACAD11A0A0J9YXS1 232 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 FGF18O76093 207 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 AFF1P51825 1210 aaKnown RBP23.52■■□□□ 1.36
PKP3-211ENST00000534401 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 EEF1DP3Q658K8 133 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 CDR2LQ86X02 465 aaPredicted RBP23.52■■□□□ 1.36
PKP3-211ENST00000534401 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.52■■□□□ 1.362e-8■■■■■ 56.1
PKP3-211ENST00000534401 SLC39A11Q8N1S5 342 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 GSTCDQ8NEC7 633 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 PPM1EQ8WY54 764 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 ZNF558Q96NG5 402 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 REEP2Q9BRK0 252 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 NXF3Q9H4D5 531 aaKnown RBP23.52■■□□□ 1.36
PKP3-211ENST00000534401 TNFSF13BQ9Y275 285 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 HES2Q9Y543 173 aa23.52■■□□□ 1.36
PKP3-211ENST00000534401 CCDC169A6NNP5 214 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 B4GALT3O60512 393 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 CUTAO60888 179 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 NPTXRO95502 500 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 PPM1AP35813 382 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 NCKAP1LP55160 1127 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 RAD51AP2Q09MP3 1159 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 RRAGBQ5VZM2 374 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 POF1BQ8WVV4 589 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 FIZ1Q96SL8 496 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 ACO2Q99798 780 aaKnown RBP23.51■■□□□ 1.35
PKP3-211ENST00000534401 NSUN3Q9H649 340 aaKnown RBP23.51■■□□□ 1.35
PKP3-211ENST00000534401 LARSQ9P2J5 1176 aaKnown RBP23.51■■□□□ 1.35
PKP3-211ENST00000534401 USP20Q9Y2K6 914 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 TDRD15B5MCY1 1934 aaKnown RBP23.51■■□□□ 1.35
PKP3-211ENST00000534401 TCHHQ07283 1943 aa23.51■■□□□ 1.35
PKP3-211ENST00000534401 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.5■■□□□ 1.35
PKP3-211ENST00000534401 ARL5CA6NH57 179 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 ABLIM1O14639 778 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 SLC16A4O15374 487 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 MAPTP10636 758 aaKnown RBP23.5■■□□□ 1.35
PKP3-211ENST00000534401 SCP2P22307 547 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 PROZP22891 400 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 TXLNAP40222 546 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 BCAR1P56945 870 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 BECN1Q14457 450 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 SPOUT1Q5T280 376 aaKnown RBP23.5■■□□□ 1.35
PKP3-211ENST00000534401 MICALL1Q8N3F8 863 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 KCNG4Q8TDN1 519 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 MIOSQ9NXC5 875 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 SPG21Q9NZD8 308 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 CFAP45Q9UL16 551 aa23.5■■□□□ 1.35
PKP3-211ENST00000534401 FSCN2O14926 492 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 DDHD2O94830 711 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 GALTP07902 379 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 SMTNP53814 917 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 DNM1Q05193 864 aaKnown RBP23.49■■□□□ 1.35
PKP3-211ENST00000534401 DSC1Q08554 894 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 E2F4Q16254 413 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 ATF7IP2Q5U623 682 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 SHC4Q6S5L8 630 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 CCDC73Q6ZRK6 1079 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 ZNF280BQ86YH2 543 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 HACE1Q8IYU2 909 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 URGCPQ8TCY9 931 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 ATXN2LQ8WWM7 1075 aaKnown RBP23.49■■□□□ 1.35
PKP3-211ENST00000534401 MRPS27Q92552 414 aaKnown RBP23.49■■□□□ 1.35
PKP3-211ENST00000534401 DNAJC19Q96DA6 116 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 GAD1Q99259 594 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 TRIM6Q9C030 488 aaPredicted RBP23.49■■□□□ 1.35
PKP3-211ENST00000534401 COG5Q9UP83 839 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 TRIP11Q15643 1979 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 CUL9Q8IWT3 2517 aa23.49■■□□□ 1.35
PKP3-211ENST00000534401 CACNB1Q02641 598 aaPredicted RBP23.48■■□□□ 1.35
PKP3-211ENST00000534401 DHX8Q14562 1220 aaKnown RBP23.48■■□□□ 1.35
PKP3-211ENST00000534401 DCAF4L1Q3SXM0 396 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 TCEAL5Q5H9L2 206 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 PDE12Q6L8Q7 609 aaKnown RBP23.48■■□□□ 1.35
PKP3-211ENST00000534401 THNSL1Q8IYQ7 743 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 RASSF8Q8NHQ8 419 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 TMEM175Q9BSA9 504 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 MRPL4Q9BYD3 311 aaKnown RBP23.48■■□□□ 1.35
PKP3-211ENST00000534401 PARVGQ9HBI0 331 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 THEGQ9P2T0 379 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms