RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 CBX4O00257 560 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CTAGE5O15320 804 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 BRINP1O60477 761 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 KINO60870 393 aaKnown RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 SHOX2O60902 331 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CAND2O75155 1236 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 SKAP2O75563 359 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 FBXO21O94952 628 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 LTFP02788 710 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CYP2C8P10632 490 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CPA1P15085 419 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PTPN1P18031 435 aaKnown RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 STAT5AP42229 794 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CCT5P48643 541 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CEBPAP49715 358 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 RAB27AP51159 221 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PDE1AP54750 535 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 AK2P54819 239 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 TMPRSS15P98073 1019 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 MTA1Q13330 715 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 NEDD9Q14511 834 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CCDC96Q2M329 555 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ALDH1L2Q3SY69 923 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PAN2Q504Q3 1202 aaKnown RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 EMC4Q5J8M3 183 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 VASNQ6EMK4 673 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ABHD17CQ6PCB6 329 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 GBP6Q6ZN66 633 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 SYDE1Q6ZW31 735 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 OVCH1Q7RTY7 1134 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 KRT26Q7Z3Y9 468 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ANKRD23Q86SG2 305 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ANKLE2Q86XL3 938 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 KIF18BQ86Y91 864 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 THNSL2Q86YJ6 484 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 UNC5CLQ8IV45 518 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 Q8N1Y9 231 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ARRDC4Q8NCT1 418 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 MSANTD4Q8NCY6 345 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 WDR66Q8TBY9 1149 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PARD3BQ8TEW8 1205 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ZBTB10Q96DT7 871 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 TSPAN17Q96FV3 270 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 SCYL1Q96KG9 808 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 TNMDQ9H2S6 317 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 GOLPH3LQ9H4A5 285 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ZNF552Q9H707 407 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 KIF9Q9HAQ2 790 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PRDM16Q9HAZ2 1276 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 VEZTQ9HBM0 779 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 DTLQ9NZJ0 730 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 B4GALT6Q9UBX8 382 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CFDP1Q9UEE9 299 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 RNF114Q9Y508 228 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 MRFAP1Q9Y605 127 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 IRAK3Q9Y616 596 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 CDHR2Q9BYE9 1310 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ABCC11Q96J66 1382 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 PRG4Q92954 1404 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 FANCAO15360 1455 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ADGRL1O94910 1474 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 ARHGEF5Q12774 1597 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 HECW2Q9P2P5 1572 aa3.58□□□□□ -1.84
CSDE1-216ENST00000534389 KDM5AP29375 1690 aaKnown RBP3.58□□□□□ -1.84
CSDE1-216ENST00000534389 A0A087X0B3 334 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 A0A0U1RQJ8 604 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 TCRBV5S2A0A599 114 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FRMD3A2A2Y4 597 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ZNF503-AS2A6NEH8 195 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 GSG1L2A8MUP6 293 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ZNF561-AS1K7EIQ3 104 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 RFXAPO00287 272 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MAN2B1O00754 1011 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 WNT9AO14904 365 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CHUKO15111 745 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 GRIN2DO15399 1336 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 BUB1BO60566 1050 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SEMA7AO75326 666 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 RASSF9O75901 435 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FARP2O94887 1054 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FSBPO95073 299 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SNUPNO95149 360 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 APOL3O95236 402 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FKBP9O95302 570 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 EFEMP2O95967 443 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 F2P00734 622 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 COL3A1P02461 1466 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CKMP06732 381 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 U2AF1L5P0DN76 240 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PDHBP11177 359 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 GJB2P29033 226 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PMLP29590 882 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 HSPA4P34932 840 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SSR1P43307 286 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 NUP153P49790 1475 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 RWDD2BP57060 319 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 GSDMDP57764 484 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 LACTBP83111 547 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 U2AF1Q01081 240 aaKnown RBP eCLIP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ICA1Q05084 483 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms