RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PMS2P1A4D2B8 440 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 NPEPPSL1A6NEC2 478 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 AKR1B10O60218 316 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 ABLIM3O94929 683 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 ADSLP30566 484 aaPredicted RBP8.47□□□□□ -1.05
CASP4-213ENST00000534356 PIN1Q13526 163 aaPredicted RBP8.47□□□□□ -1.05
CASP4-213ENST00000534356 RIN1Q13671 783 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 TMEM240Q5SV17 173 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 LIMS2Q7Z4I7 341 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 ADGRE4PQ86SQ3 457 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.47□□□□□ -1.05
CASP4-213ENST00000534356 SHCBP1Q8NEM2 672 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 NRG4Q8WWG1 115 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 RTFDC1Q9BY42 306 aaPredicted RBP8.47□□□□□ -1.05
CASP4-213ENST00000534356 RBM12Q9NTZ6 932 aaKnown RBP8.47□□□□□ -1.05
CASP4-213ENST00000534356 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
CASP4-213ENST00000534356 KIF23Q02241 960 aaPredicted RBP8.46□□□□□ -1.06
CASP4-213ENST00000534356 DUSP8Q13202 625 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 NOMO1Q15155 1222 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 FBLN7Q53RD9 439 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 THEMISQ8N1K5 641 aaPredicted RBP8.46□□□□□ -1.06
CASP4-213ENST00000534356 LILRA3Q8N6C8 439 aaPredicted RBP8.46□□□□□ -1.06
CASP4-213ENST00000534356 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
CASP4-213ENST00000534356 PLA2G12BQ9BX93 195 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 TCF7L1Q9HCS4 588 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 NCDNQ9UBB6 729 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 SERPINB13Q9UIV8 391 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 PDS5BQ9NTI5 1447 aa8.46□□□□□ -1.06
CASP4-213ENST00000534356 BAZ1AQ9NRL2 1556 aaPredicted RBP8.45□□□□□ -1.06
CASP4-213ENST00000534356 UBE2QL1A1L167 161 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 WNT3AP56704 352 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 Q6ZVL8 140 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 CMTM4Q8IZR5 234 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 OR2I1PQ8NGU4 316 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 DPF2Q92785 391 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 RHOBTB2Q9BYZ6 727 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 IL23AQ9NPF7 189 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 ZIM2Q9NZV7 527 aa8.45□□□□□ -1.06
CASP4-213ENST00000534356 E2F8A0AVK6 867 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 GPR42O15529 346 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 PHF2O75151 1096 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 ZSCAN20P17040 1043 aaPredicted RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 CASRP41180 1078 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 ADKP55263 362 aaKnown RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 DUSP2Q05923 314 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 SEPT2Q15019 361 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 NFE2Q16621 373 aaPredicted RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 MST1LQ2TV78 715 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 TCTN3Q6NUS6 607 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 GIMAP8Q8ND71 665 aaPredicted RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 HOXB13Q92826 284 aaPredicted RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 COA7Q96BR5 231 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 HSPBAP1Q96EW2 488 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 RBM15Q96T37 977 aaKnown RBP eCLIP8.44□□□□□ -1.06
CASP4-213ENST00000534356 CDH19Q9H159 772 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 METTL14Q9HCE5 456 aaKnown RBP8.44□□□□□ -1.06
CASP4-213ENST00000534356 GPRC5DQ9NZD1 345 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 ZNF180Q9UJW8 692 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 RCAN3Q9UKA8 241 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 INTUQ9ULD6 942 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 PEG3Q9GZU2 1588 aa8.44□□□□□ -1.06
CASP4-213ENST00000534356 A0A1W2PRX2 142 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 IL33O95760 270 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 PF4V1P10720 104 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
CASP4-213ENST00000534356 SLC16A1P53985 500 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 MGAT2Q10469 447 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 LRRC41Q15345 812 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 FAM180AQ6UWF9 173 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 GLB1LQ6UWU2 654 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 ZNF480Q8WV37 535 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 JPH3Q8WXH2 748 aaPredicted RBP8.43□□□□□ -1.06
CASP4-213ENST00000534356 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 OR14A2Q96R54 314 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 ENKD1Q9H0I2 346 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 LIMCH1Q9UPQ0 1083 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 ANKRD6Q9Y2G4 727 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 GIT1Q9Y2X7 761 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
CASP4-213ENST00000534356 NRP1O14786 923 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 ADCY6O43306 1168 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 ITGA10O75578 1167 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 GYPEP15421 78 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 EDNRBP24530 442 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 WASP42768 502 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 NFIXQ14938 502 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 CIR1Q86X95 450 aaPredicted RBP8.42□□□□□ -1.06
CASP4-213ENST00000534356 OR5M3Q8NGP4 307 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 NELFAQ9H3P2 528 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 MSL2Q9HCI7 577 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 TRPS1Q9UHF7 1281 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 IPPQ9Y573 584 aa8.42□□□□□ -1.06
CASP4-213ENST00000534356 WIZO95785 1651 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 WDR62O43379 1518 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 HTRA2O43464 458 aaPredicted RBP8.41□□□□□ -1.06
CASP4-213ENST00000534356 FOXS1O43638 330 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 ITGB3P05106 788 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 CT47B1P0C2W7 299 aaPredicted RBP8.41□□□□□ -1.06
CASP4-213ENST00000534356 ECHS1P30084 290 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms