RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NRP1O14786 923 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 ARF4P18085 180 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 RPA1P27694 616 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 ITIH3Q06033 890 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 ORC2Q13416 577 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 AMHR2Q16671 573 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 TTC38Q5R3I4 469 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 HFE2Q6ZVN8 426 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 CDR2LQ86X02 465 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 MCPH1Q8NEM0 835 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 GAD1Q99259 594 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 VN1R3Q9BXE9 311 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 TRIM6Q9C030 488 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 ADAM7Q9H2U9 754 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 GPRC5CQ9NQ84 441 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 MIOSQ9NXC5 875 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 STK39Q9UEW8 545 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 CDH22Q9UJ99 828 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 FNDC1Q4ZHG4 1894 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 A0A1B0GUA9 196 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 LRRIQ4A6NIV6 560 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 B4GALT5O43286 388 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
COPB1-211ENST00000534234 EPCAMP16422 314 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 MLH1P40692 756 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 PTPN14Q15678 1187 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 HACE1Q8IYU2 909 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 C12orf76Q8N812 135 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 ZFP42Q96MM3 310 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 APOL6Q9BWW8 343 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 NOL7Q9UMY1 257 aaKnown RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 GIT1Q9Y2X7 761 aa9.88□□□□□ -0.83
COPB1-211ENST00000534234 PRG3Q9Y2Y8 225 aaPredicted RBP9.88□□□□□ -0.83
COPB1-211ENST00000534234 INPPL1O15357 1258 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 LILRB3O75022 631 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 NR1I2O75469 434 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 WEE2P0C1S8 567 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 CYP11B2P19099 503 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 SP100P23497 879 aaPredicted RBP9.87□□□□□ -0.83
COPB1-211ENST00000534234 AKAP5P24588 427 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 KLRC2P26717 231 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 OR1G1P47890 313 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 SCNN1GP51170 649 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 ZXDAP98168 799 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 RARS2Q5T160 578 aaKnown RBP9.87□□□□□ -0.83
COPB1-211ENST00000534234 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 SLC27A1Q6PCB7 646 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 ZBTB8OSQ8IWT0 167 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 COLGALT2Q8IYK4 626 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 C4orf32Q8N8J7 132 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 SLC22A17Q8WUG5 538 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 MFSD14AQ96MC6 490 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 RIPOR3Q96MK2 946 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 NECTIN4Q96NY8 510 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 KLHL5Q96PQ7 755 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 EMILIN2Q9BXX0 1053 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 FZD8Q9H461 694 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 NXF3Q9H4D5 531 aaKnown RBP9.87□□□□□ -0.83
COPB1-211ENST00000534234 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 MRPL17Q9NRX2 175 aaKnown RBP9.87□□□□□ -0.83
COPB1-211ENST00000534234 DZANK1Q9NVP4 752 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 LRWD1Q9UFC0 647 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
COPB1-211ENST00000534234 PLXNA4Q9HCM2 1894 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 KIAA1671Q9BY89 1806 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 ARHGEF35A5YM69 484 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 NPTXRO95502 500 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 SOD2P04179 222 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 CNPP09543 421 aaKnown RBP9.86□□□□□ -0.83
COPB1-211ENST00000534234 MUTP22033 750 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.831e-6■■□□□ 13.2
COPB1-211ENST00000534234 CCT6AP40227 531 aaKnown RBP9.86□□□□□ -0.83
COPB1-211ENST00000534234 MTHFRP42898 656 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 FXR2P51116 673 aaKnown RBP eCLIP9.86□□□□□ -0.834e-8■■■■■ 28.9
COPB1-211ENST00000534234 DSC1Q08554 894 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 PDIA5Q14554 519 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 NBR1Q14596 966 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 HAUS3Q68CZ6 603 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 TAS1R1Q7RTX1 841 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 BMP8AQ7Z5Y6 402 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 CABP7Q86V35 215 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 GSTCDQ8NEC7 633 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 PRIMPOLQ96LW4 560 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 COLEC11Q9BWP8 271 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 POMKQ9H5K3 350 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 POLD4Q9HCU8 107 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 PRMT7Q9NVM4 692 aaPredicted RBP9.86□□□□□ -0.83
COPB1-211ENST00000534234 MARCH5Q9NX47 278 aa9.86□□□□□ -0.83
COPB1-211ENST00000534234 KLK14Q9P0G3 267 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms