RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 C1orf186Q6ZWK4 172 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 TMC7Q7Z402 723 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
UBXN1-217ENST00000534176 SMG8Q8ND04 991 aaKnown RBP17.04■□□□□ 0.32
UBXN1-217ENST00000534176 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 LPPQ93052 612 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
UBXN1-217ENST00000534176 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 NRDE2Q9H7Z3 1164 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 ODF2LQ9ULJ1 636 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
UBXN1-217ENST00000534176 A0A087WWV3 80 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 GALTP07902 379 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 NDUFV1P49821 464 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 GRIK3Q13003 919 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 TMEM119Q4V9L6 283 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 PTCRAQ6ISU1 281 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-217ENST00000534176 EP400NLQ6ZTU2 488 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 KCNN1Q92952 543 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 CPB2Q96IY4 423 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 RPS6KC1Q96S38 1066 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
UBXN1-217ENST00000534176 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
UBXN1-217ENST00000534176 CCSER1Q9C0I3 900 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 CCDC39Q9UFE4 941 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 FAN1Q9Y2M0 1017 aa17.03■□□□□ 0.32
UBXN1-217ENST00000534176 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-217ENST00000534176 PLXNA4Q9HCM2 1894 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 GRXCR2A6NFK2 248 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 CCDC169A6NNP5 214 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 HIP1RO75146 1068 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 HOXB8P17481 243 aaPredicted RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 CDC25AP30304 524 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 NRIP1P48552 1158 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 KCNQ1P51787 676 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 COASYQ13057 564 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 SMAD4Q13485 552 aaKnown RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 ZRSR1Q15695 479 aaKnown RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 DUSP6Q16828 381 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 GPR65Q8IYL9 337 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 MRPL43Q8N983 215 aaKnown RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
UBXN1-217ENST00000534176 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
UBXN1-217ENST00000534176 VCANP13611 3396 aa17.02■□□□□ 0.31
UBXN1-217ENST00000534176 XIRP2A4UGR9 3374 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 BRWD1Q9NSI6 2320 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 TTC28Q96AY4 2481 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 B4GALT5O43286 388 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 NPTXRO95502 500 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 PLS3P13797 630 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 IRS1P35568 1242 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 NPTX2P47972 431 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 SLC12A3P55017 1021 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 PEX3P56589 373 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 ERVFC1P60507 584 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 STRN3Q13033 797 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 RESTQ13127 1097 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 ELMSAN1Q6PJG2 1045 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.01■□□□□ 0.31
UBXN1-217ENST00000534176 BSNDQ8WZ55 320 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 ZNF396Q96N95 335 aaPredicted RBP17.01■□□□□ 0.31
UBXN1-217ENST00000534176 COLEC11Q9BWP8 271 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 IGFLR1Q9H665 355 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 TOPORSQ9NS56 1045 aaPredicted RBP17.01■□□□□ 0.31
UBXN1-217ENST00000534176 DPP7Q9UHL4 492 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 CD207Q9UJ71 328 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
UBXN1-217ENST00000534176 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
UBXN1-217ENST00000534176 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 C1RP00736 705 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
UBXN1-217ENST00000534176 CTSAP10619 480 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 MLH1P40692 756 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 DSC1Q08554 894 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 LONRF3Q496Y0 759 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 PLPP4Q5VZY2 271 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 ATL3Q6DD88 541 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 VPS52Q8N1B4 723 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 CASP10Q92851 521 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 PNMA5Q96PV4 448 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 GAD1Q99259 594 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 GBP3Q9H0R5 595 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 NXF3Q9H4D5 531 aaKnown RBP17■□□□□ 0.31
UBXN1-217ENST00000534176 PDZD7Q9H5P4 517 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 HCSTQ9UBK5 93 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 STK17AQ9UEE5 414 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 PARP2Q9UGN5 583 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 MTMR6Q9Y217 621 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms