RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 GGT7Q9UJ14 662 aa6.54□□□□□ -1.36
CLNS1A-212ENST00000533957 NUP98P52948 1817 aa6.54□□□□□ -1.36
CLNS1A-212ENST00000533957 LAMA4Q16363 1823 aa6.54□□□□□ -1.36
CLNS1A-212ENST00000533957 CACNA1SQ13698 1873 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 ITIH6Q6UXX5 1313 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 ZNF532Q9HCE3 1301 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 MYH7P12883 1935 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 MEIS1O00470 390 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 IDH1O75874 414 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CTSKP43235 329 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CDR1P51861 262 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 EIF5P55010 431 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 ANTXR2P58335 489 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CEBPZQ03701 1054 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 LAPTM5Q13571 262 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 NCAPHQ15003 741 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 POSTNQ15063 836 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 SPATA1Q5VX52 437 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 OLFML2BQ68BL8 750 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CATIPQ7Z7H3 387 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 TEX2Q8IWB9 1127 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 TMEFF1Q8IYR6 380 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 IQUBQ8NA54 791 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 NOC3LQ8WTT2 800 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 MZB1Q8WU39 189 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 PIGBQ92521 554 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CCDC47Q96A33 483 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 RPGRIP1Q96KN7 1286 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 C16orf45Q96MC5 204 aaPredicted RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 XPO4Q9C0E2 1151 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 NYXQ9GZU5 481 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 ANKRD2Q9GZV1 360 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 GBP3Q9H0R5 595 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 XYLT2Q9H1B5 865 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 GOLPH3LQ9H4A5 285 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 ZNHIT6Q9NWK9 470 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 IFNKQ9P0W0 207 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 DNAI1Q9UI46 699 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 FBXL21Q9UKT6 434 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 CLIC4Q9Y696 253 aa6.53□□□□□ -1.36
CLNS1A-212ENST00000533957 A0A1W2PQ45 241 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 A0A1W2PQY0 241 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TRIM75PA6NK02 468 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 A6NNZ2 444 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 VAV1P15498 845 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 PRKCAP17252 672 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ENDOUP21128 410 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 BMP8BP34820 402 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ARL4AP40617 200 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TDO2P48775 406 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 NCBP1Q09161 790 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 AUHQ13825 339 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 MORC3Q14149 939 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TUBB8Q3ZCM7 444 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 CFAP100Q494V2 611 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 SBK1Q52WX2 424 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 SLC10A5Q5PT55 438 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 FOXR2Q6PJQ5 311 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 C11orf57Q6ZUT1 292 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 HS2ST1Q7LGA3 356 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 SLCO6A1Q86UG4 719 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 DGKHQ86XP1 1220 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TMTC1Q8IUR5 882 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 CEP112Q8N8E3 955 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TMEM52Q8NDY8 209 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 CCDC12Q8WUD4 166 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 HNRNPLLQ8WVV9 542 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ANKS1AQ92625 1134 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ERCC4Q92889 916 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 BAG1Q99933 345 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 NUP58Q9BVL2 599 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 PUS3Q9BZE2 481 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 LRRC27Q9C0I9 530 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 MKRN2Q9H000 416 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 GFOD1Q9NXC2 390 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 LRP2BPQ9P2M1 347 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 NRBP1Q9UHY1 535 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 GPR55Q9Y2T6 319 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 PCDHB12Q9Y5F1 795 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 TAF6LQ9Y6J9 622 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 DDX60Q8IY21 1712 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 MYH3P11055 1940 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 LAMB2P55268 1798 aa6.52□□□□□ -1.37
CLNS1A-212ENST00000533957 ANKRD31Q8N7Z5 1873 aa6.51□□□□□ -1.37
CLNS1A-212ENST00000533957 COL11A2P13942 1736 aaPredicted RBP6.51□□□□□ -1.37
CLNS1A-212ENST00000533957 GSG1L2A8MUP6 293 aa6.51□□□□□ -1.37
CLNS1A-212ENST00000533957 H7C1D1 291 aa6.51□□□□□ -1.37
CLNS1A-212ENST00000533957 hCG_1984214I3L0E3 225 aa6.51□□□□□ -1.37
CLNS1A-212ENST00000533957 FOXP2O15409 715 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms