RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 ST18O60284 1047 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 GFRA3O60609 400 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 MYBP10242 640 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 ITGA4P13612 1032 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 NUBP1P53384 320 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 KIAA0319Q5VV43 1072 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 OTUD6AQ7L8S5 288 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 RNF168Q8IYW5 571 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-216ENST00000533908 TCP11Q8WWU5 503 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 ZFP42Q96MM3 310 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 HSD17B14Q9BPX1 270 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 MRPL17Q9NRX2 175 aaKnown RBP20.12■□□□□ 0.81
UBXN1-216ENST00000533908 ARL5CA6NH57 179 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 WNT7AO00755 349 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 TEX28O15482 410 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 MARCH6O60337 910 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 N4BP1O75113 896 aaKnown RBP20.11■□□□□ 0.81
UBXN1-216ENST00000533908 SOD2P04179 222 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 DSC1Q08554 894 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 AMHR2Q16671 573 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 ASTLQ6HA08 431 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-216ENST00000533908 ASAP3Q8TDY4 903 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 RPS6KC1Q96S38 1066 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 MTRQ99707 1265 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 ORC3Q9UBD5 711 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-216ENST00000533908 C2orf16Q68DN1 1984 aa20.11■□□□□ 0.81
UBXN1-216ENST00000533908 PI15O43692 258 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 GAS2O43903 313 aaKnown RBP20.1■□□□□ 0.81
UBXN1-216ENST00000533908 CDKL5O76039 1030 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 NPR3P17342 541 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 ARL2P36404 184 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 MLH1P40692 756 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 OR1G1P47890 313 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 SCNN1GP51170 649 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 AK2P54819 239 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 IFNLR1Q8IU57 520 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-216ENST00000533908 CNNM3Q8NE01 707 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 GSTCDQ8NEC7 633 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 EIF2AK1Q9BQI3 630 aaKnown RBP20.1■□□□□ 0.81
UBXN1-216ENST00000533908 HERC2P3Q9BVR0 1158 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 CSRNP2Q9H175 543 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 IRF2BPLQ9H1B7 796 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 KCNK12Q9HB15 430 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 ARID2Q68CP9 1835 aa20.1■□□□□ 0.81
UBXN1-216ENST00000533908 PROB1E7EW31 1015 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 ERLIN2O94905 339 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CLCN5P51795 746 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 MBTD1Q05BQ5 628 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CAPSQ13938 189 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CWF19L1Q69YN2 538 aaKnown RBP20.09■□□□□ 0.81
UBXN1-216ENST00000533908 C15orf39Q6ZRI6 1047 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CCDC149Q6ZUS6 474 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 OTOP3Q7RTS5 596 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 ASCL5Q7RTU5 278 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CDR2LQ86X02 465 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-216ENST00000533908 SLFN12Q8IYM2 578 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 NECAB1Q8N987 351 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 ACSF2Q96CM8 615 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-216ENST00000533908 B3GALT6Q96L58 329 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 NAP1L4Q99733 375 aaKnown RBP20.09■□□□□ 0.81
UBXN1-216ENST00000533908 RXFP1Q9HBX9 757 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 UBN1Q9NPG3 1134 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 MAN1C1Q9NR34 630 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 STK39Q9UEW8 545 aa20.09■□□□□ 0.81
UBXN1-216ENST00000533908 CCDC195A0A1B0GUA6 201 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 INO80B-WBP1J3KQ70 363 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 B4GALT5O43286 388 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 RFPL2O75678 378 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 LYPLA2O95372 231 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 BAG4O95429 457 aaKnown RBP20.08■□□□□ 0.81
UBXN1-216ENST00000533908 SPATA31D3P0C874 917 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 XBP1P17861 261 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 ARF4P18085 180 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-216ENST00000533908 GLRA2P23416 452 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 AXLP30530 894 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 POU5F1BQ06416 359 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 TDGQ13569 410 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 MXD4Q14582 209 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-216ENST00000533908 NOTUMQ6P988 496 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 POTEGQ6S5H5 508 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 SPATA31D4Q6ZUB0 917 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 CMASQ8NFW8 434 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-216ENST00000533908 RSAD2Q8WXG1 361 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 RABGGTAQ92696 567 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 APOL6Q9BWW8 343 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 GPR62Q9BZJ7 368 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 NXF3Q9H4D5 531 aaKnown RBP20.08■□□□□ 0.81
UBXN1-216ENST00000533908 CHST7Q9NS84 486 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 PCDHA12Q9UN75 941 aa20.08■□□□□ 0.81
UBXN1-216ENST00000533908 SPDYE4A6NLX3 237 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 NARSO43776 548 aaKnown RBP20.07■□□□□ 0.8
UBXN1-216ENST00000533908 LARGE1O95461 756 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 URODP06132 367 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 AKAP5P24588 427 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 GLUD2P49448 558 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 FLCNQ8NFG4 579 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 ZNF707Q96C28 371 aaPredicted RBP20.07■□□□□ 0.8
UBXN1-216ENST00000533908 MFSD1Q9H3U5 465 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
UBXN1-216ENST00000533908 BTBD18B2RXH4 712 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms