RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 MCM3APO60318 1980 aa6.98□□□□□ -1.29
SOX6-216ENST00000533658 MUC6Q6W4X9 2439 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 ARVCFO00192 962 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 CYP2C9P11712 490 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 COPB2P35606 906 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 RABGGTBP53611 331 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 TFF2Q03403 129 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 PPIGQ13427 754 aaKnown RBP eCLIP6.97□□□□□ -1.29
SOX6-216ENST00000533658 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 MCMDC2Q4G0Z9 681 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 SYDE2Q5VT97 1194 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 PSRC1Q6PGN9 363 aaPredicted RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 CWC27Q6UX04 472 aaKnown RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 ZNF365Q70YC5 407 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 OTOP2Q7RTS6 562 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 FAM160B2Q86V87 743 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 SULF2Q8IWU5 870 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 FAM126BQ8IXS8 530 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 CHURC1Q8WUH1 139 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 NUP133Q8WUM0 1156 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 CLEC4DQ8WXI8 215 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 C1QTNF1Q9BXJ1 281 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 CEP44Q9C0F1 390 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 UPF3AQ9H1J1 476 aaKnown RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 NKX2-4Q9H2Z4 354 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 ABHD16BQ9H3Z7 469 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 ZNF287Q9HBT7 754 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 TRMT13Q9NUP7 481 aaKnown RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 FBXO40Q9UH90 709 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 ANAPC4Q9UJX5 808 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 YBX2Q9Y2T7 364 aaKnown RBP6.97□□□□□ -1.29
SOX6-216ENST00000533658 TAF6LQ9Y6J9 622 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 MROH7Q68CQ1 1323 aa6.97□□□□□ -1.29
SOX6-216ENST00000533658 MYO9BQ13459 2157 aa6.96□□□□□ -1.29
SOX6-216ENST00000533658 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 B4E1Z4 1266 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 ORC4O43929 436 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 B4GALT4O60513 344 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 ARIH2O95376 493 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 ICAM1P05362 532 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 MYL3P08590 195 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 PDHBP11177 359 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 TOP1P11387 765 aaKnown RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 SDSP20132 328 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 NME2P22392 152 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 ARNTP27540 789 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 CST5P28325 142 aaPredicted RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 ALDH5A1P51649 535 aaPredicted RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 KCNQ1P51787 676 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 OAZ1P54368 228 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 ZP2Q05996 745 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 HDAC1Q13547 482 aaPredicted RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 ITGA7Q13683 1181 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 RAB30Q15771 203 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 LRRFIP1Q32MZ4 808 aaKnown RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 TMEM199Q8N511 208 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 VWCEQ96DN2 955 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 WDR89Q96FK6 387 aaPredicted RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 WNT8AQ9H1J5 351 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 RANBP17Q9H2T7 1088 aaKnown RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 VAT1LQ9HCJ6 419 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
SOX6-216ENST00000533658 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 COL20A1Q9P218 1284 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 MSRAQ9UJ68 235 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 ELP1O95163 1332 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 CCDC171Q6TFL3 1326 aa6.96□□□□□ -1.3
SOX6-216ENST00000533658 LCTP09848 1927 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 ASB14A6NK59 587 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 RFXAPO00287 272 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 CD4P01730 458 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 FGRP09769 529 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 TMEM253P0C7T8 217 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 NOVP48745 357 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 ZNF543Q08ER8 600 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 IKZF1Q13422 519 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 ALX1Q15699 326 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 FAM47CQ5HY64 1035 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 MFSD6Q6ZSS7 791 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 TMCO2Q7Z6W1 182 aaPredicted RBP6.95□□□□□ -1.3
SOX6-216ENST00000533658 DEFB128Q7Z7B8 93 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 CHD1LQ86WJ1 897 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 SMYD4Q8IYR2 804 aaPredicted RBP6.95□□□□□ -1.3
SOX6-216ENST00000533658 MSL3Q8N5Y2 521 aaKnown RBP6.95□□□□□ -1.3
SOX6-216ENST00000533658 PCSK9Q8NBP7 692 aaKnown RBP6.95□□□□□ -1.3
SOX6-216ENST00000533658 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 KIRREL1Q96J84 757 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 AP5M1Q9H0R1 490 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 TNKS2Q9H2K2 1166 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 HIPK3Q9H422 1215 aa6.95□□□□□ -1.3
SOX6-216ENST00000533658 CERS4Q9HA82 394 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms