RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 DMTNQ08495 405 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 KCNA1Q09470 495 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 KCNB1Q14721 858 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 MAP4K3Q8IVH8 894 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 CCDC51Q96ER9 411 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 TARS2Q9BW92 718 aaKnown RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 TNFSF13BQ9Y275 285 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 PCDHA5Q9Y5H7 936 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 A0A1W2PPC1 479 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ZNF623O75123 536 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 PROZP22891 400 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 STK4Q13043 487 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 FAM109BQ6ICB4 259 aaPredicted RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 NOTUMQ6P988 496 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ZNF598Q86UK7 904 aaKnown RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 CDR2LQ86X02 465 aaPredicted RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 PHOSPHO2Q8TCD6 241 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 CCDC34Q96HJ3 373 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 EIF2AQ9BY44 585 aaKnown RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 MRPL4Q9BYD3 311 aaKnown RBP13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 SLC4A7Q9Y6M7 1214 aa13.97□□□□□ -0.17
RPUSD4-208ENST00000533628 COL4A6Q14031 1691 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 AMHP03971 560 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ABCD1P33897 745 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 PSMD2Q13200 908 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ALCAMQ13740 583 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ATF7IP2Q5U623 682 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ZPBP2Q6X784 338 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 TMCO2Q7Z6W1 182 aaPredicted RBP13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 SLC9A7Q96T83 725 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 MTIF3Q9H2K0 278 aaKnown RBP13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 FAM105AQ9NUU6 356 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 RNF19AQ9NV58 838 aa13.96□□□□□ -0.17
RPUSD4-208ENST00000533628 N4BP3O15049 544 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 EIF3DO15371 548 aaKnown RBP eCLIP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 PRPF6O94906 941 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 GCNT3O95395 438 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 KCNJ6P48051 423 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 NCBP1Q09161 790 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 STRN3Q13033 797 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 TWF2Q6IBS0 349 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 ZBTB45Q96K62 511 aaPredicted RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 HAPLN2Q9GZV7 340 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 CLSTN2Q9H4D0 955 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 RANBP2P49792 3224 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 BMT2Q1RMZ1 405 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 ZSCAN30Q86W11 494 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 NPAS4Q8IUM7 802 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 HERC6Q8IVU3 1022 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 MYOCDQ8IZQ8 938 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 PCDHB2Q9Y5E7 798 aa13.95□□□□□ -0.18
RPUSD4-208ENST00000533628 ZMYM2Q9UBW7 1377 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 GRXCR1A8MXD5 290 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 ANKRD63C9JTQ0 380 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 ACCSQ96QU6 501 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 CDT1Q9H211 546 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 MEIS3P2A8K0S8 358 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 TISP43B9A030 160 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 TOM1L1O75674 476 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 SMC2O95347 1197 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 GJB5O95377 273 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 NPTXRO95502 500 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 EOMESO95936 686 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 PTMSP20962 102 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 RAB27AP51159 221 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 HTRA4P83105 476 aaPredicted RBP13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 CAMK4Q16566 473 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 IPPQ9Y573 584 aa13.94□□□□□ -0.18
RPUSD4-208ENST00000533628 UBE4BO95155 1302 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms