RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 LINC00271P0C7V0 271 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 IDEP14735 1019 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 SCP2P22307 547 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 CASP1P29466 404 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
SSBP3-214ENST00000533209 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 AGMOQ6ZNB7 445 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
SSBP3-214ENST00000533209 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 PAGE5Q96GU1 130 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 CASD1Q96PB1 797 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
SSBP3-214ENST00000533209 TARS2Q9BW92 718 aaKnown RBP13.18□□□□□ -0.3
SSBP3-214ENST00000533209 MRPL4Q9BYD3 311 aaKnown RBP13.18□□□□□ -0.3
SSBP3-214ENST00000533209 TMEM117Q9H0C3 514 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 TNFSF13BQ9Y275 285 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 IPPQ9Y573 584 aa13.18□□□□□ -0.3
SSBP3-214ENST00000533209 GBF1Q92538 1859 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 GOLGA6L4A6NEF3 574 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 AFMP43652 599 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 ERVK-21P61565 698 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 ASIC1P78348 528 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 GTF2BQ00403 316 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 STRN3Q13033 797 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 CUL4BQ13620 913 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 TGS1Q96RS0 853 aaKnown RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 STRA6Q9BX79 667 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 HES2Q9Y543 173 aa13.17□□□□□ -0.3
SSBP3-214ENST00000533209 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
SSBP3-214ENST00000533209 ABLIM1O14639 778 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 PPP1R37O75864 691 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ZNF202O95125 648 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ITGA4P13612 1032 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 PROZP22891 400 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 COASYQ13057 564 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 MAP4K3Q8IVH8 894 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 CLP1Q92989 425 aaKnown RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ZBTB45Q96K62 511 aaPredicted RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 C17orf80Q9BSJ5 609 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 CDT1Q9H211 546 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 MRPL44Q9H9J2 332 aaKnown RBP13.16□□□□□ -0.3
SSBP3-214ENST00000533209 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 TBX20Q9UMR3 447 aa13.16□□□□□ -0.3
SSBP3-214ENST00000533209 PVALEFA0A1B0GWK0 134 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
SSBP3-214ENST00000533209 KLRC4O43908 158 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 OFD1O75665 1012 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 PIGRP01833 764 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 MYBP10242 640 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 ABCD1P33897 745 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
SSBP3-214ENST00000533209 CASP5P51878 434 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 EHHADHQ08426 723 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 ZPBP2Q6X784 338 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 LRRC55Q6ZSA7 311 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms