RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SLC11A1P49279 550 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 FAM187BQ17R55 369 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 SLC27A1Q6PCB7 646 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 TMEM173Q86WV6 379 aaPredicted RBP25.97■■□□□ 1.75
SMPD1-209ENST00000533196 ZNF280BQ86YH2 543 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 SUSD6Q92537 303 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 EIF2AQ9BY44 585 aaKnown RBP25.97■■□□□ 1.75
SMPD1-209ENST00000533196 GPRC5CQ9NQ84 441 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 DNAJB4Q9UDY4 337 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 GIT1Q9Y2X7 761 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 PCDHB6Q9Y5E3 794 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 DCXO43602 365 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 CXCL14O95715 111 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 NBR1Q14596 966 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 PPP2R5AQ15172 486 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 RILPL1Q5EBL4 403 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 MAEAQ7L5Y9 396 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 LRFN3Q9BTN0 628 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 FZD8Q9H461 694 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.96■■□□□ 1.75
SMPD1-209ENST00000533196 FAN1Q9Y2M0 1017 aa25.96■■□□□ 1.75
SMPD1-209ENST00000533196 DDHD2O94830 711 aa25.95■■□□□ 1.74
SMPD1-209ENST00000533196 POMCP01189 267 aa25.95■■□□□ 1.74
SMPD1-209ENST00000533196 RBM10P98175 930 aaKnown RBP25.95■■□□□ 1.74
SMPD1-209ENST00000533196 TBC1D32Q96NH3 1257 aa25.95■■□□□ 1.74
SMPD1-209ENST00000533196 PHF7Q9BWX1 381 aaPredicted RBP25.95■■□□□ 1.74
SMPD1-209ENST00000533196 ARL5CA6NH57 179 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 CLASP2O75122 1294 aaKnown RBP25.94■■□□□ 1.74
SMPD1-209ENST00000533196 NAMPTP43490 491 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 TPRNQ4KMQ1 711 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 TMEM87AQ8NBN3 555 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 BCL7CQ8WUZ0 217 aaPredicted RBP25.94■■□□□ 1.74
SMPD1-209ENST00000533196 S1PR5Q9H228 398 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 RNF39Q9H2S5 420 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 HCFC2Q9Y5Z7 792 aa25.94■■□□□ 1.74
SMPD1-209ENST00000533196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.93■■□□□ 1.74
SMPD1-209ENST00000533196 LOC730098B7Z3J9 87 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 NRP1O14786 923 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 B4GALT5O43286 388 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 B4GALT3O60512 393 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 GJB2P29033 226 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 AFF1P51825 1210 aaKnown RBP25.93■■□□□ 1.74
SMPD1-209ENST00000533196 CBX2Q14781 532 aaPredicted RBP25.93■■□□□ 1.74
SMPD1-209ENST00000533196 KRT79Q5XKE5 535 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 MCTP1Q6DN14 999 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 SYCE2Q6PIF2 218 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 DTHD1Q6ZMT9 781 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 PPFIBP1Q86W92 1011 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 COLGALT2Q8IYK4 626 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 SNX29Q8TEQ0 813 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 KIFAP3Q92845 792 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 GAD1Q99259 594 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 BHMT2Q9H2M3 363 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 C11orf16Q9NQ32 467 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 KIAA1024Q9UPX6 916 aa25.93■■□□□ 1.74
SMPD1-209ENST00000533196 H3BQV1 296 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 NR1I2O75469 434 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 CA8P35219 290 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 MLH1P40692 756 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 DSC1Q08554 894 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 ECM1Q16610 540 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 MAPK6Q16659 721 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 LLGL2Q6P1M3 1020 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 KCTD17Q8N5Z5 321 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 IFT74Q96LB3 600 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 NXF3Q9H4D5 531 aaKnown RBP25.92■■□□□ 1.74
SMPD1-209ENST00000533196 DDX19AQ9NUU7 478 aaKnown RBP25.92■■□□□ 1.74
SMPD1-209ENST00000533196 HES2Q9Y543 173 aa25.92■■□□□ 1.74
SMPD1-209ENST00000533196 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.92■■□□□ 1.74
SMPD1-209ENST00000533196 PRR33A8MZF0 331 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 N4BP3O15049 544 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 CD2BP2O95400 341 aaKnown RBP25.91■■□□□ 1.74
SMPD1-209ENST00000533196 NPTXRO95502 500 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 EFNA5P52803 228 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 ITIH3Q06033 890 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 HERC4Q5GLZ8 1057 aaPredicted RBP25.91■■□□□ 1.74
SMPD1-209ENST00000533196 RNF135Q8IUD6 432 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 DEPTORQ8TB45 409 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 BSNDQ8WZ55 320 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 VN1R3Q9BXE9 311 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 DZANK1Q9NVP4 752 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 DNM3Q9UQ16 869 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 SSX2IPQ9Y2D8 614 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 C5orf42Q9H799 3197 aa25.91■■□□□ 1.74
SMPD1-209ENST00000533196 ACKR2O00590 384 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 SCNN1GP51170 649 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 PRPF4BQ13523 1007 aaKnown RBP25.9■■□□□ 1.74
SMPD1-209ENST00000533196 PTPN14Q15678 1187 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 CES5AQ6NT32 575 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 NECTIN4Q96NY8 510 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 APOL6Q9BWW8 343 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 EMILIN2Q9BXX0 1053 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 CCDC113Q9H0I3 377 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 SMC3Q9UQE7 1217 aa25.9■■□□□ 1.74
SMPD1-209ENST00000533196 SOD2P04179 222 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 PRKCBP05771 671 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 ATP2C1P98194 919 aaPredicted RBP25.89■■□□□ 1.74
SMPD1-209ENST00000533196 GRIK3Q13003 919 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 ZFP42Q96MM3 310 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 ADPGKQ9BRR6 497 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms