RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 PTPRHQ9HD43 1115 aa15.43■□□□□ 0.06
HIF3A-215ENST00000533145 SAMSN1Q9NSI8 373 aaKnown RBP15.43■□□□□ 0.06
HIF3A-215ENST00000533145 TNFSF13BQ9Y275 285 aa15.43■□□□□ 0.06
HIF3A-215ENST00000533145 CNTNAP2Q9UHC6 1331 aa15.43■□□□□ 0.06
HIF3A-215ENST00000533145 LRRC10BA6NIK2 292 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 DCDC2CA8MYV0 355 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 HNRNPDLO14979 420 aaKnown RBP15.42■□□□□ 0.06
HIF3A-215ENST00000533145 CLIC2O15247 247 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 MAPK13O15264 365 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 GNA14O95837 355 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 NR2F2P24468 414 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
HIF3A-215ENST00000533145 MARSP56192 900 aaKnown RBP15.42■□□□□ 0.06
HIF3A-215ENST00000533145 BFSP2Q13515 415 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
HIF3A-215ENST00000533145 ZNF618Q5T7W0 954 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 TRAF7Q6Q0C0 670 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 FAM114A1Q8IWE2 563 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 TMEM40Q8WWA1 233 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 BICD1Q96G01 975 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 FBXL18Q96ME1 805 aa15.42■□□□□ 0.06
HIF3A-215ENST00000533145 A0A0B4J269 797 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 ABLIM1O14639 778 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 TSPAN1O60635 241 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 CSDE1O75534 798 aaKnown RBP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 ERLIN2O94905 339 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 SFPQP23246 707 aaKnown RBP eCLIP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 TLE2Q04725 743 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 SPAG1Q07617 926 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 MCL1Q07820 350 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 FAAP100Q0VG06 881 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-215ENST00000533145 FBXO47Q5MNV8 452 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 CBWD1Q9BRT8 395 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 GRPEL1Q9HAV7 217 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 KIAA1586Q9HCI6 787 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 GINS2Q9Y248 185 aa15.41■□□□□ 0.06
HIF3A-215ENST00000533145 TISP43B9A030 160 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 N4BP3O15049 544 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 SLC16A3O15427 465 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 CLDN3O15551 220 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 B4GALT5O43286 388 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 EN2P19622 333 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 EEF1GP26641 437 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 MRE11P49959 708 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 POU5F1Q01860 360 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 TCP11X2Q5H9J9 407 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 MPZL3Q6UWV2 235 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 CATSPER4Q7RTX7 472 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 FAM228AQ86W67 206 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 ZBTB45Q96K62 511 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 HAPLN2Q9GZV7 340 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 AGPAT5Q9NUQ2 364 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 NOC2LQ9Y3T9 749 aaKnown RBP15.4■□□□□ 0.06
HIF3A-215ENST00000533145 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
HIF3A-215ENST00000533145 GPR182O15218 404 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 PQBP1O60828 265 aaKnown RBP15.39■□□□□ 0.05
HIF3A-215ENST00000533145 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 AKAP3O75969 853 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 CTSHP09668 335 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 SELPP16109 830 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 CDK11BP21127 795 aaKnown RBP15.39■□□□□ 0.05
HIF3A-215ENST00000533145 PSMC2P35998 433 aaKnown RBP15.39■□□□□ 0.05
HIF3A-215ENST00000533145 ENPEPQ07075 957 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 LRRC26Q2I0M4 334 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 SARM1Q6SZW1 724 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 GPD1LQ8N335 351 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 NOC4LQ9BVI4 516 aaKnown RBP15.39■□□□□ 0.05
HIF3A-215ENST00000533145 PDZD7Q9H5P4 517 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
HIF3A-215ENST00000533145 ERVK-5Q9HDB9 667 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 CHST12Q9NRB3 414 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 TANC1Q9C0D5 1861 aa15.39■□□□□ 0.05
HIF3A-215ENST00000533145 KCNJ18B7U540 433 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 OGTO15294 1046 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 EXTL3O43909 919 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 EXOC3O60645 756 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 MCF2P10911 925 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 ATP1A3P13637 1013 aa15.38■□□□□ 0.05
HIF3A-215ENST00000533145 FGFR4P22455 802 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms