RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 ARL4CP56559 192 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 HNRNPLLQ8WVV9 542 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 DDTLA6NHG4 134 aaPredicted RBP16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 MYO1CO00159 1063 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 MAFGO15525 162 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 ABL1P00519 1130 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 MKRN3Q13064 507 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 PLA2G4FQ68DD2 849 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 GINM1Q9NU53 330 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 ASNSD1Q9NWL6 643 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.21
PCDHA3-202ENST00000532566 TMEM253P0C7T8 217 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ECE1P42892 770 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 PRPSAP1Q14558 356 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 PPP6R3Q5H9R7 873 aaPredicted RBP16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 DNAAF3Q8N9W5 541 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ZNF668Q96K58 619 aaPredicted RBP16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 RUSC1Q9BVN2 902 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ARHGAP42A6NI28 874 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 P4HA2O15460 535 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 KRT7P08729 469 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 COPB2P35606 906 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 CDK17Q00537 523 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 METTL23Q86XA0 190 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 MMGT1Q8N4V1 131 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 A0A087X0T9 212 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ANKRD65E5RJM6 399 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 FAM228BP0C875 321 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 SAT1P21673 171 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ITKQ08881 620 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 RNF149Q8NC42 400 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 ELAC2Q9BQ52 826 aaKnown RBP16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
PCDHA3-202ENST00000532566 NFAT5O94916 1531 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 RPS6P62753 249 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 C1orf54Q8WWF1 131 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 SCYL1Q96KG9 808 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 VCX3BQ9H321 246 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 ANKEF1Q9NU02 776 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TTC7AQ9ULT0 858 aaPredicted RBP16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TTI1O43156 1089 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 CYTH3O43739 400 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 SHMT1P34896 483 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 ACOT2P49753 483 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 NPEPPSP55786 919 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 SNRPFP62306 86 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TRAPPC11Q7Z392 1133 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 MYOZ2Q9NPC6 264 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 RASA4BC9J798 803 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 RASA4O43374 803 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 BZW1Q7L1Q6 419 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 TTC25Q96NG3 672 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
PCDHA3-202ENST00000532566 IQANK1A0A1B0GTG1 560 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 GMNCA6NCL1 334 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 H2AFXP16104 143 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 CIITAP33076 1130 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SLC1A1P43005 524 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 KIF22Q14807 665 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 FAM133BQ5BKY9 247 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 PARVAQ9NVD7 372 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SMIM22K7EJ46 135 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 ICAM1P05362 532 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 ZSCAN20P17040 1043 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 CAP2P40123 477 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 NR1H3Q13133 447 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 GIT2Q14161 759 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SRRM1Q8IYB3 904 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 INTUQ9ULD6 942 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 PCGF5Q86SE9 256 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SLC30A5Q8TAD4 765 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 MMP19Q99542 508 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms