RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	IRF2BP1	Q8IU81	584 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	CREBRF	Q8IUR6	639 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	TMEM199	Q8N511	208 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	KIFAP3	Q92845	792 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	BAD	Q92934	168 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	DRC1	Q96MC2	740 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	OSMR	Q99650	979 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	REEP2	Q9BRK0	252 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	TIPIN	Q9BVW5	301 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	ADAMTS10	Q9H324	1103 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	ZHX3	Q9H4I2	956 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474	SEL1L	Q9UBV2	794 aa		10.35	□□□□□ -0.75
NXF1-209	ENST00000531474		A0A087WZ62	844 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	LRRIQ4	A6NIV6	560 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	GPR32	O75388	356 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	FAM13A	O94988	1023 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	GHR	P10912	638 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	CSF2RA	P15509	400 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	FECH	P22830	423 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	GLRA2	P23416	452 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	RFC2	P35250	354 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	CRYBB1	P53674	252 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	FPGS	Q05932	587 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	PPP2R3A	Q06190	1150 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	MAPK7	Q13164	816 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	CAPS	Q13938	189 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	MXD4	Q14582	209 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	MBTPS1	Q14703	1052 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	EDRF1	Q3B7T1	1238 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	E4F1	Q66K89	784 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	CYP26C1	Q6V0L0	522 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	DEFB128	Q7Z7B8	93 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	ZNF410	Q86VK4	478 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	DAW1	Q8N136	415 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	ZNF710	Q8N1W2	664 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	RNF149	Q8NC42	400 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	KIAA0895	Q8NCT3	520 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	OR8K1	Q8NGG5	319 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	DEPTOR	Q8TB45	409 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	ZNF507	Q8TCN5	953 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	BSND	Q8WZ55	320 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	IFT74	Q96LB3	600 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	C16orf45	Q96MC5	204 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	ERGIC2	Q96RQ1	377 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	EDEM3	Q9BZQ6	932 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	CDHR5	Q9HBB8	845 aa		10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474	LUC7L2	Q9Y383	392 aa	Known RBP	10.34	□□□□□ -0.75
NXF1-209	ENST00000531474		A0A1W2PQJ5	194 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	TRIM49B	A6NDI0	452 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CCDC169	A6NNP5	214 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	SFI1	A8K8P3	1242 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	RBAK-RBAKDN	I3L0D1	243 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PES1	O00541	588 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	ASAP2	O43150	1006 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CALU	O43852	315 aa	Predicted RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	NBN	O60934	754 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	MFAP3L	O75121	409 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PARN	O95453	639 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	DARS	P14868	501 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	RPL13	P26373	211 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	MAGEA10	P43363	369 aa	Predicted RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PHKA2	P46019	1235 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PMS1	P54277	932 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	ADK	P55263	362 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PEX3	P56589	373 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CDC42EP1	Q00587	391 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PAK2	Q13177	524 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	DMP1	Q13316	513 aa	Predicted RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PPIG	Q13427	754 aa	Known RBP eCLIP	10.33	□□□□□ -0.76	3e-9	■■■□□ 14.7
NXF1-209	ENST00000531474	GIT2	Q14161	759 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	LPIN1	Q14693	890 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	PPP2R5A	Q15172	486 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	MAN2A1	Q16706	1144 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	FBXO47	Q5MNV8	452 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	TSHZ1	Q6ZSZ6	1077 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	TMEM139	Q8IV31	216 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CNOT6L	Q96LI5	555 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	KIFC3	Q9BVG8	833 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	OSBPL7	Q9BZF2	842 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	SEMA6B	Q9H3T3	888 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	TRMT1	Q9NXH9	659 aa	Known RBP	10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	TAB2	Q9NYJ8	693 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	ODF2L	Q9ULJ1	636 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CAPN11	Q9UMQ6	739 aa		10.33	□□□□□ -0.76
NXF1-209	ENST00000531474	CETN3	O15182	167 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	EIF3D	O15371	548 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	CSDE1	O75534	798 aa	Known RBP	10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	RPS6KA5	O75582	802 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	CCDC175	P0C221	793 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	ACR	P10323	421 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	PLS3	P13797	630 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	EIF4B	P23588	611 aa	Known RBP	10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	CD52	P31358	61 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	CASP14	P31944	242 aa		10.32	□□□□□ -0.76
NXF1-209	ENST00000531474	KRT9	P35527	623 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms