RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ORC2Q13416 577 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 TRIM67Q6ZTA4 783 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 PPFIBP1Q86W92 1011 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 MCPH1Q8NEM0 835 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 FBXO18Q8NFZ0 1043 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 RIPOR3Q96MK2 946 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 GAD1Q99259 594 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 POLR3CQ9BUI4 534 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 RNF39Q9H2S5 420 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 TSHZ2Q9NRE2 1034 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 SH2B1Q9NRF2 756 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 WDR81Q562E7 1941 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 ARL5CA6NH57 179 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 NR1I2O75469 434 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 OR52Z1P0C646 297 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 ARF4P18085 180 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 MTHFRP42898 656 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 AMHR2Q16671 573 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 APOL6Q9BWW8 343 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 DBR1Q9UK59 544 aaKnown RBP24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 HES2Q9Y543 173 aa24.71■■□□□ 1.55
TRAPPC4-210ENST00000531290 LRRIQ4A6NIV6 560 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 MED24O75448 989 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 SSBP05455 408 aaKnown RBP eCLIP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 EPCAMP16422 314 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 SP100P23497 879 aaPredicted RBP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 MLH1P40692 756 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 OR1G1P47890 313 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 PTPN14Q15678 1187 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 ATAT1Q5SQI0 421 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 RARS2Q5T160 578 aaKnown RBP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 CABP7Q86V35 215 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 C12orf76Q8N812 135 aaPredicted RBP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 SLC22A17Q8WUG5 538 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 VN1R3Q9BXE9 311 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 GPRC5CQ9NQ84 441 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 MRPL17Q9NRX2 175 aaKnown RBP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 GIT1Q9Y2X7 761 aa24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 PRG3Q9Y2Y8 225 aaPredicted RBP24.7■■□□□ 1.54
TRAPPC4-210ENST00000531290 TMEM221A6NGB7 291 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 SPDYE4A6NLX3 237 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 M0R296 226 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 KLRC2P26717 231 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 RPA1P27694 616 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 TTC38Q5R3I4 469 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 SLC27A1Q6PCB7 646 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 ZBTB33Q86T24 672 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 NOSTRINQ8IVI9 506 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 ZBTB8OSQ8IWT0 167 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 PBXIP1Q96AQ6 731 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 CDH22Q9UJ99 828 aa24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 NOL7Q9UMY1 257 aaKnown RBP24.69■■□□□ 1.54
TRAPPC4-210ENST00000531290 ARHGEF35A5YM69 484 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 INPPL1O15357 1258 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 B4GALT5O43286 388 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 TRAPPC10P48553 1259 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 SCNN1GP51170 649 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 BMP8AQ7Z5Y6 402 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 COLGALT2Q8IYK4 626 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 ZFP42Q96MM3 310 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 KLHL5Q96PQ7 755 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 KCNH6Q9H252 994 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 POMKQ9H5K3 350 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 PRMT7Q9NVM4 692 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 SSX2IPQ9Y2D8 614 aa24.68■■□□□ 1.54
TRAPPC4-210ENST00000531290 A0A1B0GUA9 196 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 NPTXRO95502 500 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 SOD2P04179 222 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 URODP06132 367 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 WEE2P0C1S8 567 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 AKAP5P24588 427 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 PTPN21Q16825 1174 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 POTEGQ6S5H5 508 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 PADI6Q6TGC4 694 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 CDR2LQ86X02 465 aaPredicted RBP24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 COLEC11Q9BWP8 271 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 NXF3Q9H4D5 531 aaKnown RBP24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 MIOSQ9NXC5 875 aa24.67■■□□□ 1.54
TRAPPC4-210ENST00000531290 C2CD2LO14523 706 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 CNPP09543 421 aaKnown RBP24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 SIGLEC14Q08ET2 396 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 TMEM132AQ24JP5 1023 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 HAUS3Q68CZ6 603 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 KANK3Q6NY19 840 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 PRIMPOLQ96LW4 560 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 FBXL18Q96ME1 805 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 KIF2CQ99661 725 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 C2orf40Q9H1Z8 148 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 PARP2Q9UGN5 583 aa24.66■■□□□ 1.54
TRAPPC4-210ENST00000531290 LILRB3O75022 631 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 CYP11B2P19099 503 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 MUTP22033 750 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 DSC1Q08554 894 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 KIAA1841Q6NSI8 718 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 TMC5Q6UXY8 1006 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 PPP4R3CPQ6ZMV5 832 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 SUGP1Q8IWZ8 645 aaKnown RBP24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 FZD8Q9H461 694 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 MARCH5Q9NX47 278 aa24.65■■□□□ 1.54
TRAPPC4-210ENST00000531290 CCT6AP40227 531 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms