RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RNF39Q9H2S5 420 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 BMP2KQ9NSY1 1161 aaPredicted RBP10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 ANKRD11Q6UB99 2663 aaPredicted RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 C2CD2LO14523 706 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 ZBTB39O15060 712 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 TEX28O15482 410 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 EIF5BO60841 1220 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 CFHP08603 1231 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 HMGB1P09429 215 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RPS6KB1P23443 525 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 KLRC2P26717 231 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 ATXN1P54253 815 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 DSC1Q08554 894 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 TOB2Q14106 344 aaPredicted RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 COLGALT2Q8IYK4 626 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 ST13P5Q8NFI4 369 aaPredicted RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 CMASQ8NFW8 434 aaPredicted RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 BICD2Q8TD16 824 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 PRPF31Q8WWY3 499 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RSPH1Q8WYR4 309 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RUBCNQ92622 972 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 TMEM143Q96AN5 459 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 EIF2AQ9BY44 585 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RSAD1Q9HA92 442 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 SH3GLB2Q9NR46 395 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 MIOSQ9NXC5 875 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 DLGAP2Q9P1A6 1054 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 COL4A3BPQ9Y5P4 624 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 R4GN57 208 aa10.3□□□□□ -0.76
CHMP4A-205ENST00000531158 INPPL1O15357 1258 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 DTNBO60941 627 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 CDC45O75419 566 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SOD2P04179 222 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SPATA31D3P0C874 917 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SKIP12755 728 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SDHBP21912 280 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 PSMC5P62195 406 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 FGD1P98174 961 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 CDC42EP1Q00587 391 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SPIRE1Q08AE8 756 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 BLOC1S2Q6QNY1 142 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SPATA31D4Q6ZUB0 917 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 GSTCDQ8NEC7 633 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 HAS1Q92839 578 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 ZFP42Q96MM3 310 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 TMEM175Q9BSA9 504 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 HERC2P3Q9BVR0 1158 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 EMILIN2Q9BXX0 1053 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 INO80BQ9C086 356 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 RXFP1Q9HBX9 757 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 WDR6Q9NNW5 1121 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 KCNMB3Q9NPA1 279 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 XPNPEP1Q9NQW7 623 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 MRPL17Q9NRX2 175 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 PRG3Q9Y2Y8 225 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 HES2Q9Y543 173 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 PDCD11Q14690 1871 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 CLUHO75153 1309 aa10.29□□□□□ -0.76
CHMP4A-205ENST00000531158 CCDC195A0A1B0GUA6 201 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 ARL5CA6NH57 179 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 POTEMA6NI47 508 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 TSPAN1O60635 241 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 SEC24BO95487 1268 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 GLULP15104 373 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 MLH1P40692 756 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 DNM2P50570 870 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 AK2P54819 239 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 NLRP5P59047 1200 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 LAMTOR4Q0VGL1 99 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 PPP2R5CQ13362 524 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 AMHR2Q16671 573 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 INF2Q27J81 1249 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 MOXD1Q6UVY6 613 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 URGCPQ8TCY9 931 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 GAD1Q99259 594 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 RHOBTB2Q9BYZ6 727 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 CHST7Q9NS84 486 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 GJB4Q9NTQ9 266 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 EPS15L1Q9UBC2 864 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms