RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PI15O43692 258 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
CAPN1-219ENST00000530495 ERLIN2O94905 339 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 URODP06132 367 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 ADH1AP07327 375 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 AOC1P19801 751 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 EMC2Q15006 297 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 XKR9Q5GH70 373 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 CWF19L1Q69YN2 538 aaKnown RBP16.65■□□□□ 0.26
CAPN1-219ENST00000530495 RNF168Q8IYW5 571 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-219ENST00000530495 FLCNQ8NFG4 579 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 LXNQ9BS40 222 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 HERC2P3Q9BVR0 1158 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 ZSWIM4Q9H7M6 989 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 RXFP1Q9HBX9 757 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 DUSP12Q9UNI6 340 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 IPPQ9Y573 584 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
CAPN1-219ENST00000530495 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.26
CAPN1-219ENST00000530495 C2CD2LO14523 706 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 ZBTB39O15060 712 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 TEX28O15482 410 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 TSPAN1O60635 241 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 PAPLNO95428 1278 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 C1RP00736 705 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 OR1G1P47890 313 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 AK2P54819 239 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 PTENP60484 403 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 POU5F1BQ06416 359 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 DSC1Q08554 894 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 SPIRE1Q08AE8 756 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 DYDC2Q96IM9 177 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 GAD1Q99259 594 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MTRQ99707 1265 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 EIF2AQ9BY44 585 aaKnown RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 WDR6Q9NNW5 1121 aaKnown RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MAN1C1Q9NR34 630 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MIOSQ9NXC5 875 aa16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.25
CAPN1-219ENST00000530495 MARCH6O60337 910 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
CAPN1-219ENST00000530495 CDKL5O76039 1030 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 SLITRK3O94933 977 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 XBP1P17861 261 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 GLUD2P49448 558 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 DSG1Q02413 1049 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
CAPN1-219ENST00000530495 SCRN1Q12765 414 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 CTTNQ14247 550 aaKnown RBP16.63■□□□□ 0.25
CAPN1-219ENST00000530495 NCAPH2Q6IBW4 605 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 NOTUMQ6P988 496 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 ELMSAN1Q6PJG2 1045 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 PIK3AP1Q6ZUJ8 805 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 SLFN12Q8IYM2 578 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 HDAC7Q8WUI4 952 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 RTP3Q9BQQ7 232 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 XPNPEP1Q9NQW7 623 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 CHST7Q9NS84 486 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 GJB4Q9NTQ9 266 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 WNT16Q9UBV4 365 aa16.63■□□□□ 0.25
CAPN1-219ENST00000530495 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-219ENST00000530495 NR1I2O75469 434 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
CAPN1-219ENST00000530495 GLUD1P00367 558 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 MLH1P40692 756 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 FRMD5Q7Z6J6 570 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 CCDC105Q8IYK2 499 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 SIX5Q8N196 739 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 STAMQ92783 540 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 NKD2Q969F2 451 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-219ENST00000530495 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 HSD17B14Q9BPX1 270 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 FBXL21Q9UKT6 434 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 GIT1Q9Y2X7 761 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 HES2Q9Y543 173 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
CAPN1-219ENST00000530495 INO80B-WBP1J3KQ70 363 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 LYPLA2O95372 231 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 SCNN1GP51170 649 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 FOXK2Q01167 660 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 TFDP1Q14186 410 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 AMHR2Q16671 573 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
CAPN1-219ENST00000530495 GPR65Q8IYL9 337 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 DTWD2Q8NBA8 298 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 GSTCDQ8NEC7 633 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 NXPE3Q969Y0 559 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms