RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
SOX6-213ENST00000530378 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
SOX6-213ENST00000530378 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
SOX6-213ENST00000530378 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 IKBKBO14920 756 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 CAVIN2O95810 425 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 CD4P01730 458 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 EIF4BP23588 611 aaKnown RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 CRYBB1P53674 252 aaPredicted RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 OSTNP61366 133 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 MGAT3Q09327 533 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 NFX1Q12986 1120 aaKnown RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 ADAM9Q13443 819 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 PTPN21Q16825 1174 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 ZBTB41Q5SVQ8 909 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 FZD8Q9H461 694 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 GRPEL1Q9HAV7 217 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 HSPBP1Q9NZL4 362 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 PIN4Q9Y237 131 aaKnown RBP11.65□□□□□ -0.54
SOX6-213ENST00000530378 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 TRIP11Q15643 1979 aa11.65□□□□□ -0.54
SOX6-213ENST00000530378 FSD2A1L4K1 749 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 DCDC2CA8MYV0 355 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 ACKR2O00590 384 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.55
SOX6-213ENST00000530378 RPS6KA5O75582 802 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.55
SOX6-213ENST00000530378 CD52P31358 61 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 CCL23P55773 120 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 FAAP100Q0VG06 881 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 MBTPS1Q14703 1052 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 ZNF568Q3ZCX4 644 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 SRGAP1Q7Z6B7 1085 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 NME8Q8N427 588 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 SCLYQ96I15 445 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 FAM84AQ96KN4 292 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 ACO2Q99798 780 aaKnown RBP11.65□□□□□ -0.55
SOX6-213ENST00000530378 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 NFKBIZQ9BYH8 718 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 AGO3Q9H9G7 860 aaKnown RBP11.65□□□□□ -0.55
SOX6-213ENST00000530378 KCNG1Q9UIX4 513 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 TRAF3IP3Q9Y228 551 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.55
SOX6-213ENST00000530378 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 KCNJ18B7U540 433 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 CITO14578 2027 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 CEP290O15078 2479 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 AP5Z1O43299 807 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 EXOC3O60645 756 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 ADRB2P07550 413 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 CDK11BP21127 795 aaKnown RBP11.64□□□□□ -0.55
SOX6-213ENST00000530378 CYP2C18P33260 490 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 KCNJ12Q14500 433 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 LPIN1Q14693 890 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 FBXO47Q5MNV8 452 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 LRRC8DQ7L1W4 858 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
SOX6-213ENST00000530378 IRF2BP1Q8IU81 584 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 CEP120Q8N960 986 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
SOX6-213ENST00000530378 ANK1P16157 1881 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 CETN3O15182 167 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 CLDN3O15551 220 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 AKAP3O75969 853 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 NPTXRO95502 500 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ACOT2P49753 483 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 TPM4P67936 248 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 FKBP3Q00688 224 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 POU5F1BQ06416 359 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 PAK2Q13177 524 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 NOLC1Q14978 699 aaKnown RBP eCLIP11.63□□□□□ -0.55
SOX6-213ENST00000530378 EDRF1Q3B7T1 1238 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 CT47A1Q5JQC4 288 aaPredicted RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 CDKAL1Q5VV42 579 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ANKRD33Q7Z3H0 272 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 THNSL1Q8IYQ7 743 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 GOLGA5Q8TBA6 731 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 NOC4LQ9BVI4 516 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 APOL6Q9BWW8 343 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 CDT1Q9H211 546 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 MMRN2Q9H8L6 949 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ST3GAL5Q9UNP4 418 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 TOM1L1O75674 476 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 PIGRP01833 764 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 SELPP16109 830 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ZNF18P17022 549 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms