RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 GLIS3Q8NEA6 775 aa19.15■□□□□ 0.66
CLP1-204ENST00000529773 PHOSPHO2Q8TCD6 241 aa19.15■□□□□ 0.66
CLP1-204ENST00000529773 CCDC47Q96A33 483 aaKnown RBP19.15■□□□□ 0.66
CLP1-204ENST00000529773 SLC9A7Q96T83 725 aa19.15■□□□□ 0.66
CLP1-204ENST00000529773 ELAC1Q9H777 363 aaKnown RBP19.15■□□□□ 0.66
CLP1-204ENST00000529773 RMND1Q9NWS8 449 aa19.15■□□□□ 0.66
CLP1-204ENST00000529773 TBC1D7Q9P0N9 293 aa19.15■□□□□ 0.66
CLP1-204ENST00000529773 TOM1L1O75674 476 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 DEFB103AP81534 67 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 STK4Q13043 487 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 COBLL1Q53SF7 1204 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 ATF7IP2Q5U623 682 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLP1-204ENST00000529773 RBM43Q6ZSC3 357 aaKnown RBP19.14■□□□□ 0.65
CLP1-204ENST00000529773 ZNF598Q86UK7 904 aaKnown RBP19.14■□□□□ 0.65
CLP1-204ENST00000529773 ZNF507Q8TCN5 953 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 SCFD1Q8WVM8 642 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 CPB2Q96IY4 423 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 RNPC3Q96LT9 517 aaKnown RBP19.14■□□□□ 0.65
CLP1-204ENST00000529773 TARS2Q9BW92 718 aaKnown RBP19.14■□□□□ 0.65
CLP1-204ENST00000529773 GTPBP4Q9BZE4 634 aaKnown RBP19.14■□□□□ 0.65
CLP1-204ENST00000529773 FAM105AQ9NUU6 356 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 STYXL1Q9Y6J8 313 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 ZMYM2Q9UBW7 1377 aa19.14■□□□□ 0.65
CLP1-204ENST00000529773 AMHP03971 560 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 SKIP12755 728 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 ATF7P17544 494 aaPredicted RBP19.13■□□□□ 0.65
CLP1-204ENST00000529773 HOXD13P35453 343 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 KCNJ6P48051 423 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 KCNA1Q09470 495 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 EEF1DP3Q658K8 133 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 TWF2Q6IBS0 349 aaKnown RBP19.13■□□□□ 0.65
CLP1-204ENST00000529773 SLC39A4Q6P5W5 647 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 TOP1MTQ969P6 601 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 ACCSQ96QU6 501 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 NUP62CLQ9H1M0 184 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 RC3H2Q9HBD1 1191 aaKnown RBP19.13■□□□□ 0.65
CLP1-204ENST00000529773 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
CLP1-204ENST00000529773 TMEM161AQ9NX61 479 aa19.13■□□□□ 0.65
CLP1-204ENST00000529773 HNRNPDLO14979 420 aaKnown RBP19.12■□□□□ 0.65
CLP1-204ENST00000529773 MCL1Q07820 350 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 DCAF4L1Q3SXM0 396 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 MPZL3Q6UWV2 235 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 MRPL10Q7Z7H8 261 aaKnown RBP19.12■□□□□ 0.65
CLP1-204ENST00000529773 ECHDC2Q86YB7 292 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 NPAS4Q8IUM7 802 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 RSPH1Q8WYR4 309 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 EIF2AQ9BY44 585 aaKnown RBP19.12■□□□□ 0.65
CLP1-204ENST00000529773 SLC39A2Q9NP94 309 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 KIAA1468Q9P260 1216 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 EXOC7Q9UPT5 735 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 USP20Q9Y2K6 914 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 PCDHB2Q9Y5E7 798 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 SLC4A7Q9Y6M7 1214 aa19.12■□□□□ 0.65
CLP1-204ENST00000529773 ZBBXA8MT70 800 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 PRPF6O94906 941 aaKnown RBP19.11■□□□□ 0.65
CLP1-204ENST00000529773 EOMESO95936 686 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 ZNF658Q5TYW1 1059 aaPredicted RBP19.11■□□□□ 0.65
CLP1-204ENST00000529773 TRIML1Q8N9V2 468 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 SMG8Q8ND04 991 aaKnown RBP19.11■□□□□ 0.65
CLP1-204ENST00000529773 TMEM174Q8WUU8 243 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 ERCC4Q92889 916 aaPredicted RBP19.11■□□□□ 0.65
CLP1-204ENST00000529773 ADPGKQ9BRR6 497 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 CDT1Q9H211 546 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 MAN1B1Q9UKM7 699 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 IPPQ9Y573 584 aa19.11■□□□□ 0.65
CLP1-204ENST00000529773 INPPL1O15357 1258 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 FAM189A1O60320 539 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 GJB5O95377 273 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 MCF2P10911 925 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 LIG4P49917 911 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 SNRPFP62306 86 aaKnown RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 HTRA4P83105 476 aaPredicted RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 MORC3Q14149 939 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLP1-204ENST00000529773 CAMK4Q16566 473 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 KLHL40Q2TBA0 621 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 ZNF568Q3ZCX4 644 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 APBB1IPQ7Z5R6 666 aaPredicted RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 HERC6Q8IVU3 1022 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 MYOCDQ8IZQ8 938 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 GUF1Q8N442 669 aaKnown RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 HAPLN2Q9GZV7 340 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 RNF19AQ9NV58 838 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 COLQQ9Y215 455 aaPredicted RBP19.1■□□□□ 0.65
CLP1-204ENST00000529773 GDAQ9Y2T3 454 aa19.1■□□□□ 0.65
CLP1-204ENST00000529773 A0A0B4J269 797 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 TGFB1I1O43294 461 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 KIF20AO95235 890 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 NPTXRO95502 500 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 STAG3L1P0CL83 205 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 BMP6P22004 513 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 ADSSP30520 456 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 CDR2LQ86X02 465 aaPredicted RBP19.09■□□□□ 0.65
CLP1-204ENST00000529773 BICD1Q96G01 975 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 GBP3Q9H0R5 595 aa19.09■□□□□ 0.65
CLP1-204ENST00000529773 KCTD10Q9H3F6 313 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms