RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 NKD2Q969F2 451 aaPredicted RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 ACSF2Q96CM8 615 aaPredicted RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 PGBD4Q96DM1 585 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 ZNF274Q96GC6 653 aaPredicted RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 JAKMIP1Q96N16 626 aaKnown RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 MBOAT7Q96N66 472 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 GBP4Q96PP9 640 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 LLPHQ9BRT6 129 aaKnown RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 RNF26Q9BY78 433 aaPredicted RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 SFXN1Q9H9B4 322 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 SH3GLB2Q9NR46 395 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 VPS54Q9P1Q0 977 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 SEPT9Q9UHD8 586 aaPredicted RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 DUSP12Q9UNI6 340 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 PIN4Q9Y237 131 aaKnown RBP6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 FAN1Q9Y2M0 1017 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 KIF3AQ9Y496 699 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 PCDHB2Q9Y5E7 798 aa6.94□□□□□ -1.3
CHRNA6-202ENST00000529467 EML1O00423 815 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 NRP1O14786 923 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 NARSO43776 548 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 N4BP1O75113 896 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 TDP2O95551 362 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 EFEMP2O95967 443 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 PDIA3P30101 505 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 HOXA11P31270 313 aaPredicted RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 AK2P54819 239 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 NLRP5P59047 1200 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 PSMC5P62195 406 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 RNASELQ05823 741 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 ANGPT1Q15389 498 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 UBXN11Q5T124 520 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 CCDC149Q6ZUS6 474 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 CATSPER4Q7RTX7 472 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 RNF168Q8IYW5 571 aaPredicted RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 ADSSL1Q8N142 457 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 DTWD2Q8NBA8 298 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 CMASQ8NFW8 434 aaPredicted RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 ETNPPLQ8TBG4 499 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 RTP3Q9BQQ7 232 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 TMEM175Q9BSA9 504 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 SLC26A6Q9BXS9 759 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 EMILIN2Q9BXX0 1053 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 GBP3Q9H0R5 595 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 MINDY3Q9H8M7 445 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 RSAD1Q9HA92 442 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 MRPL17Q9NRX2 175 aaKnown RBP6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 AGPAT5Q9NUQ2 364 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 IGSF9Q9P2J2 1179 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 WNT16Q9UBV4 365 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 STK39Q9UEW8 545 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 ATP6V1DQ9Y5K8 247 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 CACNA1IQ9P0X4 2223 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 FANCMQ8IYD8 2048 aa6.93□□□□□ -1.3
CHRNA6-202ENST00000529467 TDRD15B5MCY1 1934 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 CCDC195A0A1B0GUA6 201 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 KRBA1A5PL33 1030 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 TEX28O15482 410 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 PAPLNO95428 1278 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 POMCP01189 267 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SOD2P04179 222 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SSBP05455 408 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 NCLP19338 710 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 ID4P47928 161 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 NPEPPSP55786 919 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 CCT2P78371 535 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 HMGN5P82970 282 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 NPY5RQ15761 445 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 KIAA0319Q5VV43 1072 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 PLA2G4FQ68DD2 849 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 MOXD1Q6UVY6 613 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 CYP26C1Q6V0L0 522 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 ERMP1Q7Z2K6 904 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SRGAP1Q7Z6B7 1085 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 COLGALT2Q8IYK4 626 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SIX5Q8N196 739 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SLC44A3Q8N4M1 653 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 URGCPQ8TCY9 931 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 PRPF31Q8WWY3 499 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 RSAD2Q8WXG1 361 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 NLRP4Q96MN2 994 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 FAM193BQ96PV7 902 aaPredicted RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 RPS6KC1Q96S38 1066 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 JPH2Q9BR39 696 aaPredicted RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 RHOBTB2Q9BYZ6 727 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 DHX33Q9H6R0 707 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 NCOA5Q9HCD5 579 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 WDR6Q9NNW5 1121 aaKnown RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 MARCH5Q9NX47 278 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 MIOSQ9NXC5 875 aa6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 WRAP73Q9P2S5 460 aaPredicted RBP6.92□□□□□ -1.3
CHRNA6-202ENST00000529467 PCDHA4Q9UN74 947 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms