RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CEP89Q96ST8 783 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 GMLQ99445 158 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 PSMD1Q99460 953 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 TRIM51Q9BSJ1 452 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 TMEM117Q9H0C3 514 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 QTRT2Q9H974 415 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 ACTR5Q9H9F9 607 aaPredicted RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 HSPBP1Q9NZL4 362 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 TMOD2Q9NZR1 351 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 ZNF70Q9UC06 446 aaPredicted RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 DDX20Q9UHI6 824 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 NOCTQ9UK39 431 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 SNX24Q9Y343 169 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 RBBP6Q7Z6E9 1792 aaKnown RBP9.03□□□□□ -0.96
CSTF3-208ENST00000528865 SMCHD1A6NHR9 2005 aa9.03□□□□□ -0.96
CSTF3-208ENST00000528865 CNTNAP1P78357 1384 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 K7ENM7 598 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 FSCN2O14926 492 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 GHRP10912 638 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 RARGP13631 454 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 COMTP21964 271 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TMOD1P28289 359 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 HPDP32754 393 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 CAP2P40123 477 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 USP8P40818 1118 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MMP13P45452 471 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 QARSP47897 775 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 GPC3P51654 580 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 CDR1P51861 262 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SMTNP53814 917 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ZNF211Q13398 564 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TNIP1Q15025 636 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SIX1Q15475 284 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 NOP9Q86U38 636 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MCF2L2Q86YR7 1114 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SLC13A5Q86YT5 568 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SHC3Q92529 594 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 KRT35Q92764 455 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 GLG1Q92896 1179 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ART4Q93070 314 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TATDN2Q93075 761 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MAGOHBQ96A72 148 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SEC16BQ96JE7 1060 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 MFSD14AQ96MC6 490 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 FBXL18Q96ME1 805 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 KREMEN1Q96MU8 473 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 XPO6Q96QU8 1125 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 CBWD1Q9BRT8 395 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 NTPCRQ9BSD7 190 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ROPN1BQ9BZX4 212 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 CCDC134Q9H6E4 229 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 LRRC19Q9H756 370 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ROPN1Q9HAT0 212 aaPredicted RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 PPANQ9NQ55 473 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 A1CFQ9NQ94 594 aaKnown RBP9.02□□□□□ -0.97
CSTF3-208ENST00000528865 KCNH7Q9NS40 1196 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ANKEF1Q9NU02 776 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TBC1D22BQ9NU19 505 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 CTTNBP2NLQ9P2B4 639 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 UVRAGQ9P2Y5 699 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 EXOC7Q9UPT5 735 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 ZHX2Q9Y6X8 837 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 SLX4Q8IY92 1834 aa9.02□□□□□ -0.97
CSTF3-208ENST00000528865 LOXHD1Q8IVV2 1947 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 CAND2O75155 1236 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 LRRN2O75325 713 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 RASSF9O75901 435 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SGPL1O95470 568 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 AGTP01019 485 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PYGMP11217 842 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 RPL21P46778 160 aaKnown RBP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 GCLMP48507 274 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PLTPP55058 493 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 MFAP3P55082 362 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 UBXN2AP68543 259 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 FMO1Q01740 532 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 ADCY2Q08462 1091 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 IFT88Q13099 833 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PRPF4BQ13523 1007 aaKnown RBP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 RASA3Q14644 834 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SLMAPQ14BN4 828 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 AOC3Q16853 763 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SEL1L2Q5TEA6 688 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 ACAD10Q6JQN1 1059 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms