RNA–Protein interactions for RNA: ENST00000528781.1

AP001189.6-201, humanhuman

TSL 1 (best) BASIC

Gene AP001189.6, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.6-201ENST00000528781 ZNF143P52747 638 aaPredicted RBP3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 DDR1Q08345 913 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 SLC39A6Q13433 755 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 GAREM2Q75VX8 874 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 VPS37DQ86XT2 251 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 RBM12BQ8IXT5 1001 aaKnown RBP3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 PIP4K2CQ8TBX8 421 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 LGR4Q9BXB1 951 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 TANGO6Q9C0B7 1094 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 PACSIN3Q9UKS6 424 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 MRVI1Q9Y6F6 885 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 USP42Q9H9J4 1324 aaKnown RBP3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 NPC1L1Q9UHC9 1359 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 C10orf71Q711Q0 1435 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 ATP10DQ9P241 1426 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 PXDNLA1KZ92 1463 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 C4BP0C0L5 1744 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 PKD1L3Q7Z443 1732 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 ANKRD26Q9UPS8 1709 aa3.83□□□□□ -1.8
AP001189.6-201ENST00000528781 SOS1Q07889 1333 aaPredicted RBP3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 CAPN14A8MX76 684 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 PROB1E7EW31 1015 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 SMAD7O15105 426 aaKnown RBP3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 DIAPH1O60610 1272 aaKnown RBP3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 PRELPP51888 382 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 TUSC3Q13454 348 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 C1orf141Q5JVX7 400 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 CC2D1BQ5T0F9 858 aaKnown RBP3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 DENND5AQ6IQ26 1287 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 VHLLQ6RSH7 139 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 BTN2A2Q8WVV5 523 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 ANAPC16Q96DE5 110 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 PHACTR3Q96KR7 559 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 NARFQ9UHQ1 456 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 ZNHIT2Q9UHR6 403 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 ZBTB1Q9Y2K1 713 aa3.82□□□□□ -1.8
AP001189.6-201ENST00000528781 C5P01031 1676 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 CEMIPQ8WUJ3 1361 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ZAR1LA6NP61 321 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 KCNQ3O43525 872 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 LTFP02788 710 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 SSBP05455 408 aaKnown RBP eCLIP3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 PDE6AP16499 860 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 HSPA6P17066 643 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 CD38P28907 300 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 CHRNA5P30532 468 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ECI1P42126 302 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 RBL2Q08999 1139 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 SERINC3Q13530 473 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 SF3A1Q15459 793 aaKnown RBP3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 EPHA10Q5JZY3 1008 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ZNF790Q6PG37 636 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 USP30Q70CQ3 517 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 LARP4Q71RC2 724 aaKnown RBP eCLIP3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ADGRG3Q86Y34 549 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 VRK3Q8IV63 474 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 D2HGDHQ8N465 521 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 CELF2-AS1Q8N7Q2 184 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ZNF496Q96IT1 587 aaPredicted RBP3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 JAM3Q9BX67 310 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 ZDHHC5Q9C0B5 715 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 TELO2Q9Y4R8 837 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 NPFFR2Q9Y5X5 522 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 TUBGCP6Q96RT7 1819 aa3.81□□□□□ -1.8
AP001189.6-201ENST00000528781 COL3A1P02461 1466 aaPredicted RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 UBR3Q6ZT12 1888 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 KIF20BQ96Q89 1820 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 KLRG2A4D1S0 409 aaPredicted RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 PMS2P1A4D2B8 440 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 TBX1O43435 398 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 TOMM70O94826 608 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CPP00450 1065 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 ITGAVP06756 1048 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 SNRPB2P08579 225 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 NAT2P11245 290 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CDK4P11802 303 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CRHR2Q13324 411 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 SF1Q15637 639 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 PRSS53Q2L4Q9 553 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 TNNI3KQ59H18 835 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 DALRD3Q5D0E6 543 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 ZNF362Q5T0B9 420 aaPredicted RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 MRM1Q6IN84 353 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 DPP8Q6V1X1 898 aaPredicted RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 RHOUQ7L0Q8 258 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CPLX3Q8WVH0 158 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 HNRNPLLQ8WVV9 542 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CCDC140Q96MF4 163 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 KIAA1683Q9H0B3 1180 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 NRDE2Q9H7Z3 1164 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 AGO3Q9H9G7 860 aaKnown RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 NMRK2Q9NPI5 230 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 MSRB2Q9Y3D2 182 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 USP16Q9Y5T5 823 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 ZNF831Q5JPB2 1677 aa3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 CICQ96RK0 1608 aaPredicted RBP3.8□□□□□ -1.8
AP001189.6-201ENST00000528781 KCPQ6ZWJ8 1503 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms