RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 SMOC2Q9H3U7 446 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 DUSP12Q9UNI6 340 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
CTTN-212ENST00000527962 USP34Q70CQ2 3546 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 CCDC195A0A1B0GUA6 201 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 STK25O00506 426 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 LILRB3O75022 631 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 C1RP00736 705 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 AOC1P19801 751 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
CTTN-212ENST00000527962 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 WASF1Q92558 559 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 NXPE3Q969Y0 559 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
CTTN-212ENST00000527962 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 HERC2P3Q9BVR0 1158 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 COLEC11Q9BWP8 271 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 MINDY3Q9H8M7 445 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 MAN1C1Q9NR34 630 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 KCNJ14Q9UNX9 436 aa17.55■□□□□ 0.4
CTTN-212ENST00000527962 PRR23AA6NEV1 266 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 ARL5CA6NH57 179 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 INO80B-WBP1J3KQ70 363 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 CREMQ03060 361 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 POU5F1BQ06416 359 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 NPY5RQ15761 445 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 NCAPH2Q6IBW4 605 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 PIK3AP1Q6ZUJ8 805 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 SIX5Q8N196 739 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
CTTN-212ENST00000527962 PLEKHA4Q9H4M7 779 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 BRMS1Q9HCU9 246 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
CTTN-212ENST00000527962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTTN-212ENST00000527962 WNT16Q9UBV4 365 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 IPPQ9Y573 584 aa17.54■□□□□ 0.4
CTTN-212ENST00000527962 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
CTTN-212ENST00000527962 INPPL1O15357 1258 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 TEX28O15482 410 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 B4GALT3O60512 393 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 PTENP60484 403 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 ASCL5Q7RTU5 278 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 TPH2Q8IWU9 490 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 COLGALT2Q8IYK4 626 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 GPR65Q8IYL9 337 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 SMG8Q8ND04 991 aaKnown RBP17.53■□□□□ 0.4
CTTN-212ENST00000527962 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 GAD1Q99259 594 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 RXFP1Q9HBX9 757 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
CTTN-212ENST00000527962 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
CTTN-212ENST00000527962 TSPAN1O60635 241 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 DGAT1O75907 488 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 MLH1P40692 756 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 AFF1P51825 1210 aaKnown RBP17.52■□□□□ 0.4
CTTN-212ENST00000527962 DSG1Q02413 1049 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 USP41Q3LFD5 358 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 KIAA0319Q5VV43 1072 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 FRMD5Q7Z6J6 570 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 CCDC105Q8IYK2 499 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 SMG7Q92540 1137 aaKnown RBP17.52■□□□□ 0.4
CTTN-212ENST00000527962 HAS1Q92839 578 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 DYDC2Q96IM9 177 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
CTTN-212ENST00000527962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.52■□□□□ 0.49e-7■■■■□ 25.1
CTTN-212ENST00000527962 RGL1Q9NZL6 768 aa17.52■□□□□ 0.4
CTTN-212ENST00000527962 WRAP73Q9P2S5 460 aaPredicted RBP17.52■□□□□ 0.4
CTTN-212ENST00000527962 CLUHO75153 1309 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 SCNN1GP51170 649 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 CYP4A11Q02928 519 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 DSC1Q08554 894 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 CTTNQ14247 550 aaKnown RBP17.51■□□□□ 0.39
CTTN-212ENST00000527962 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
CTTN-212ENST00000527962 DTWD2Q8NBA8 298 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 MARCH5Q9NX47 278 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 ZDHHC7Q9NXF8 308 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 EPS15L1Q9UBC2 864 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 PCDHA12Q9UN75 941 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 MYO10Q9HD67 2058 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 CFAP54Q96N23 3096 aa17.51■□□□□ 0.39
CTTN-212ENST00000527962 NPR3P17342 541 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 ANGPT1Q15389 498 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 TAS1R1Q7RTX1 841 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 IFNLR1Q8IU57 520 aaPredicted RBP17.5■□□□□ 0.39
CTTN-212ENST00000527962 APOL6Q9BWW8 343 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 EIF2AQ9BY44 585 aaKnown RBP17.5■□□□□ 0.39
CTTN-212ENST00000527962 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 CHST7Q9NS84 486 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 FNIP2Q9P278 1114 aa17.5■□□□□ 0.39
CTTN-212ENST00000527962 PI15O43692 258 aa17.49■□□□□ 0.39
CTTN-212ENST00000527962 TADA2AO75478 443 aa17.49■□□□□ 0.39
CTTN-212ENST00000527962 SLITRK3O94933 977 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms