RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 IRAK3Q9Y616 596 aa12.35□□□□□ -0.43
NR1H3-230ENST00000527949 USP34Q70CQ2 3546 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 MED24O75448 989 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 ERLIN2O94905 339 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 CYP11B2P19099 503 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 GLRA2P23416 452 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 MTHFRP42898 656 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
NR1H3-230ENST00000527949 CLCN5P51795 746 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 ERVFC1P60507 584 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 CAPSQ13938 189 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 AMHR2Q16671 573 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 FAM187BQ17R55 369 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
NR1H3-230ENST00000527949 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
NR1H3-230ENST00000527949 NOTUMQ6P988 496 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 AGMOQ6ZNB7 445 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 TMEM175Q9BSA9 504 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 MFSD1Q9H3U5 465 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 TBC1D13Q9NVG8 400 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
NR1H3-230ENST00000527949 TSPAN1O60635 241 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 BCAR1P56945 870 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 GIT2Q14161 759 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 ZDHHC14Q8IZN3 488 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 URGCPQ8TCY9 931 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 ASAP3Q8TDY4 903 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 C2orf40Q9H1Z8 148 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 NRDE2Q9H7Z3 1164 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 RSAD1Q9HA92 442 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
NR1H3-230ENST00000527949 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 DZANK1Q9NVP4 752 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
NR1H3-230ENST00000527949 TRIOO75962 3097 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 SLC26A4O43511 780 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 USO1O60763 962 aaKnown RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 GALTP07902 379 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 PTGDRQ13258 359 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 TMC7Q7Z402 723 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 GPR65Q8IYL9 337 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 HACE1Q8IYU2 909 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 MRPL43Q8N983 215 aaKnown RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 SMG8Q8ND04 991 aaKnown RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 SEMA4AQ9H3S1 761 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 FZD8Q9H461 694 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 LRWD1Q9UFC0 647 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 GIT1Q9Y2X7 761 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
NR1H3-230ENST00000527949 C5orf42Q9H799 3197 aa12.32□□□□□ -0.44
NR1H3-230ENST00000527949 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ZFHX2Q9C0A1 2572 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 CTSAP10619 480 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ITGA4P13612 1032 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ARF4P18085 180 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 NAMPTP43490 491 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ID4P47928 161 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 RBM10P98175 930 aaKnown RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ATP2C1P98194 919 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ATAT1Q5SQI0 421 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 KIFAP3Q92845 792 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 LPPQ93052 612 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 ZBP1Q9H171 429 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-230ENST00000527949 IPPQ9Y573 584 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
NR1H3-230ENST00000527949 PHLPP2Q6ZVD8 1323 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms