RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
SRPRA-202ENST00000527817 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 PJA1Q8NG27 643 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 NLRP4Q96MN2 994 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 PRKD2Q9BZL6 878 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 PIDD1Q9HB75 910 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
SRPRA-202ENST00000527817 KMT2BQ9UMN6 2715 aaPredicted RBP13.79□□□□□ -0.2
SRPRA-202ENST00000527817 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
SRPRA-202ENST00000527817 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 CYP3A7P24462 503 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 ANO5Q75V66 913 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 GJA10Q969M2 543 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 CNTNAP3BQ96NU0 1288 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 CNTNAP3Q9BZ76 1288 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 FBXO4Q9UKT5 387 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
SRPRA-202ENST00000527817 POTEMA6NI47 508 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 TGM5O43548 720 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 MYBP10242 640 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 OR1G1P47890 313 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PSMC5P62195 406 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 DSC1Q08554 894 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 VARS2Q5ST30 1063 aaKnown RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PALB2Q86YC2 1186 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 CCDC148Q8NFR7 591 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PHKBQ93100 1093 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 DDX23Q9BUQ8 820 aaKnown RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 FOXQ1Q9C009 403 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PRG3Q9Y2Y8 225 aaPredicted RBP13.77□□□□□ -0.21
SRPRA-202ENST00000527817 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SRPRA-202ENST00000527817 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 KANSL1LA0AUZ9 987 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 SPTLC1O15269 473 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 ASAP2O43150 1006 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 NR1I2O75469 434 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 KRT37O76014 449 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 GPC5P78333 572 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
SRPRA-202ENST00000527817 KRT32Q14532 448 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 MBOAT7Q96N66 472 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 RPP25Q9BUL9 199 aaKnown RBP13.76□□□□□ -0.21
SRPRA-202ENST00000527817 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 DHX33Q9H6R0 707 aaKnown RBP13.76□□□□□ -0.21
SRPRA-202ENST00000527817 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 MIOSQ9NXC5 875 aa13.76□□□□□ -0.21
SRPRA-202ENST00000527817 LAMTOR5O43504 91 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 LRRN2O75325 713 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 ZMYND10O75800 440 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 AXLP30530 894 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 MAGEA9P43362 315 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 NPEPPSP55786 919 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 PRKCQQ04759 706 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 NTRK3Q16288 839 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 RSPO2Q6UXX9 243 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 GET4Q7L5D6 327 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 SLC7A3Q8WY07 619 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 GAD1Q99259 594 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-202ENST00000527817 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 IPPQ9Y573 584 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 PCDHGA2Q9Y5H1 932 aa13.75□□□□□ -0.21
SRPRA-202ENST00000527817 PRR5-ARHGAP8B1AHC4 643 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRPRA-202ENST00000527817 FSHRP23945 695 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 QARSP47897 775 aaKnown RBP13.74□□□□□ -0.21
SRPRA-202ENST00000527817 ARHGAP8P85298 464 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 FGD1P98174 961 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 CREMQ03060 361 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 SNW1Q13573 536 aaKnown RBP13.74□□□□□ -0.21
SRPRA-202ENST00000527817 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 PLA2G4FQ68DD2 849 aa13.74□□□□□ -0.21
SRPRA-202ENST00000527817 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms