RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ADSSP30520 456 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 MFAP3P55082 362 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 C11orf63Q6NUN7 778 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 CD302Q8IX05 232 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 IQCKQ8N0W5 287 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 CCDC26Q8TAB7 109 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 ZBTB9Q96C00 473 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 CEP170P1Q96L14 293 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 TAS2R14Q9NYV8 317 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 KCNG1Q9UIX4 513 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 WDR90Q96KV7 1748 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 ESYT3A0FGR9 886 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 H0YCG3 227 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 STBD1O95210 358 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 GPC3P51654 580 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 CFAP58Q5T655 872 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 ZSWIM2Q8NEG5 633 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 ARHGEF26Q96DR7 871 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 TEX13BQ9BXU2 312 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 PDLIM7Q9NR12 457 aa16.58■□□□□ 0.24
USH1C-207ENST00000527720 SIP14410 1827 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 MIF4GDA9UHW6 222 aaKnown RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 ANKRD63C9JTQ0 380 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 GPC5P78333 572 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 PALB2Q86YC2 1186 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 CBWD2Q8IUF1 395 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 C1orf131Q8NDD1 294 aaKnown RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 SLC20A1Q8WUM9 679 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 SHC3Q92529 594 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 JPH1Q9HDC5 661 aaPredicted RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 A6NNZ2 444 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 ZNF862O60290 1169 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 MTA2O94776 668 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 FTLP02792 175 aaPredicted RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 FAM153BP0C7A2 387 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 GARTP22102 1010 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 SCP2P22307 547 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 HMGCS2P54868 508 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 ERVK-9P63128 1117 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 TUBB8Q3ZCM7 444 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 FAM153CQ494X1 144 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 BRDTQ58F21 947 aaPredicted RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 FAM153AQ9UHL3 310 aa16.57■□□□□ 0.24
USH1C-207ENST00000527720 NOCTQ9UK39 431 aaKnown RBP16.57■□□□□ 0.24
USH1C-207ENST00000527720 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 RGS20O76081 388 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 TMEM132BQ14DG7 1078 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 EPS8L1Q8TE68 723 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 SEC14L1Q92503 715 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 KCNN1Q92952 543 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 COG5Q9UP83 839 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 PPP2R3BQ9Y5P8 575 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
USH1C-207ENST00000527720 PTPROQ16827 1216 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 NOL9Q5SY16 702 aaKnown RBP16.56■□□□□ 0.24
USH1C-207ENST00000527720 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 BSNDQ8WZ55 320 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 KREMEN1Q96MU8 473 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 DDX47Q9H0S4 455 aaKnown RBP16.56■□□□□ 0.24
USH1C-207ENST00000527720 ATP6V0A4Q9HBG4 840 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 HOXC10Q9NYD6 342 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
USH1C-207ENST00000527720 SPATA31C2B4DYI2 1134 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 FGGP02679 453 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 ECHS1P30084 290 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 ABHD15Q6UXT9 468 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 TRMT1LQ7Z2T5 733 aaKnown RBP16.55■□□□□ 0.24
USH1C-207ENST00000527720 GPD1LQ8N335 351 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 NT5C1BQ96P26 610 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 A1CFQ9NQ94 594 aaKnown RBP16.55■□□□□ 0.24
USH1C-207ENST00000527720 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms