RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PLAGL2Q9UPG8 496 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 ATP6V1DQ9Y5K8 247 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 NPHP3-ACAD11A0A0J9YXS1 232 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 A0A1B0GUA9 196 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 GRM6O15303 877 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 SLC16A4O15374 487 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 CUTAO60888 179 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 PPP6R2O75170 966 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 DDIT3P35638 169 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-209ENST00000527469 KRT17Q04695 432 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 KCNT2Q6UVM3 1135 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 USP49Q70CQ1 688 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 SV2BQ7L1I2 683 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
CAPN1-209ENST00000527469 DAW1Q8N136 415 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 MYCT1Q8N699 235 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 MICAL1Q8TDZ2 1067 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 SPIRE2Q8WWL2 714 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 REEP2Q9BRK0 252 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 MRPL4Q9BYD3 311 aaKnown RBP14.73□□□□□ -0.05
CAPN1-209ENST00000527469 PANK2Q9BZ23 570 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 CCDC113Q9H0I3 377 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 HCSTQ9UBK5 93 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 PARP2Q9UGN5 583 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 HES2Q9Y543 173 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 COL6A3P12111 3177 aa14.73□□□□□ -0.05
CAPN1-209ENST00000527469 FNDC1Q4ZHG4 1894 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-209ENST00000527469 MEIS3P2A8K0S8 358 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 NR1I2O75469 434 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 OFD1O75665 1012 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 FGF18O76093 207 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 ITGB1P05556 798 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 LINC00271P0C7V0 271 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 DNM1Q05193 864 aaKnown RBP14.72□□□□□ -0.05
CAPN1-209ENST00000527469 MAPK7Q13164 816 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 DCAF4L1Q3SXM0 396 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 AGMOQ6ZNB7 445 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 LRRC55Q6ZSA7 311 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 PDILTQ8N807 584 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 SMG8Q8ND04 991 aaKnown RBP14.72□□□□□ -0.05
CAPN1-209ENST00000527469 RPS6KC1Q96S38 1066 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 TCHPQ9BT92 498 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 NXF3Q9H4D5 531 aaKnown RBP14.72□□□□□ -0.05
CAPN1-209ENST00000527469 PDZD7Q9H5P4 517 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 NSUN3Q9H649 340 aaKnown RBP14.72□□□□□ -0.05
CAPN1-209ENST00000527469 CWH43Q9H720 699 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 BLOC1S4Q9NUP1 217 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 TBC1D13Q9NVG8 400 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 SPG21Q9NZD8 308 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 THEGQ9P2T0 379 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 GIT1Q9Y2X7 761 aa14.72□□□□□ -0.05
CAPN1-209ENST00000527469 MYH15Q9Y2K3 1946 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 POMCP01189 267 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 AKAP5P24588 427 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 CA8P35219 290 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 PBX3P40426 434 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 MLH1P40692 756 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.05
CAPN1-209ENST00000527469 BCAR1P56945 870 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 KRT85P78386 507 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 UBE3AQ05086 875 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 BMS1Q14692 1282 aaKnown RBP14.71□□□□□ -0.05
CAPN1-209ENST00000527469 ARSHQ5FYA8 562 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 EP400NLQ6ZTU2 488 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 SPPL3Q8TCT6 385 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 POF1BQ8WVV4 589 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 BICD1Q96G01 975 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 TMEM169Q96HH4 297 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 TMEM134Q9H6X4 195 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 FAM13BQ9NYF5 915 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 USP20Q9Y2K6 914 aa14.71□□□□□ -0.05
CAPN1-209ENST00000527469 ARL5CA6NH57 179 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 K7ENM7 598 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 BRD1O95696 1058 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 SCP2P22307 547 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 ABCD1P33897 745 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 AAK1Q2M2I8 961 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 FAM178BQ8IXR5 827 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 HLA-CQ95604 372 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 GAD1Q99259 594 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 LRRC27Q9C0I9 530 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 ENTPD7Q9NQZ7 604 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 TLR9Q9NR96 1032 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 COG5Q9UP83 839 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 TNFSF13BQ9Y275 285 aa14.7□□□□□ -0.06
CAPN1-209ENST00000527469 KIAA1671Q9BY89 1806 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
CAPN1-209ENST00000527469 SCNN1GP51170 649 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 YARSP54577 528 aaKnown RBP14.69□□□□□ -0.06
CAPN1-209ENST00000527469 GIT2Q14161 759 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 TCEAL5Q5H9L2 206 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 NT5DC1Q5TFE4 455 aa14.69□□□□□ -0.06
CAPN1-209ENST00000527469 DYMQ7RTS9 669 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms