RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 PGBD4Q96DM1 585 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 MRPL38Q96DV4 380 aaKnown RBP12.36□□□□□ -0.43
CTSB-214ENST00000527243 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 REEP2Q9BRK0 252 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 PHLPP2Q6ZVD8 1323 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 REV3LO60673 3130 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 ZMYM2Q9UBW7 1377 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 LAG3P18627 525 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 DNAJB1P25685 340 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 NCKAP1LP55160 1127 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 PRPF4BQ13523 1007 aaKnown RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 LONRF3Q496Y0 759 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 GLB1LQ6UWU2 654 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 GSTCDQ8NEC7 633 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 KCNG4Q8TDN1 519 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
CTSB-214ENST00000527243 RSAD1Q9HA92 442 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 TBC1D13Q9NVG8 400 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 PCDHA7Q9UN72 937 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 HES2Q9Y543 173 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
CTSB-214ENST00000527243 A0A0C4DFX4 3053 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 MYMKA6NI61 221 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 K7ERI5 159 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 N4BP3O15049 544 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 SLC16A4O15374 487 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 NPTXRO95502 500 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 MAPTP10636 758 aaKnown RBP12.34□□□□□ -0.43
CTSB-214ENST00000527243 ITGA4P13612 1032 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 PROZP22891 400 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 TXLNAP40222 546 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 PTPROQ16827 1216 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 RRAGBQ5VZM2 374 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 SLC39A11Q8N1S5 342 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 DNAJC19Q96DA6 116 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
CTSB-214ENST00000527243 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 ALG13Q9NP73 1137 aaKnown RBP12.34□□□□□ -0.43
CTSB-214ENST00000527243 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 KMT5AQ9NQR1 393 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 PRDM6Q9NQX0 595 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 AAASQ9NRG9 546 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 KCNG1Q9UIX4 513 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
CTSB-214ENST00000527243 ARL5CA6NH57 179 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 FGF18O76093 207 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 DDHD2O94830 711 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 PBX3P40426 434 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 UBE3AQ05086 875 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 DSC1Q08554 894 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 DHX8Q14562 1220 aaKnown RBP12.33□□□□□ -0.44
CTSB-214ENST00000527243 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
CTSB-214ENST00000527243 ATF7IP2Q5U623 682 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 ZNF280BQ86YH2 543 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 LEO1Q8WVC0 666 aaPredicted RBP12.33□□□□□ -0.44
CTSB-214ENST00000527243 POF1BQ8WVV4 589 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 ZNF558Q96NG5 402 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 GAD1Q99259 594 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.44
CTSB-214ENST00000527243 PARVGQ9HBI0 331 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 MIOSQ9NXC5 875 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
CTSB-214ENST00000527243 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
CTSB-214ENST00000527243 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 FRMD3A2A2Y4 597 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 FSCN2O14926 492 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 PIGRP01833 764 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 GALTP07902 379 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 SCP2P22307 547 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 IRS1P35568 1242 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 PPM1AP35813 382 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 MLH1P40692 756 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 SMTNP53814 917 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 BCAR1P56945 870 aa12.32□□□□□ -0.44
CTSB-214ENST00000527243 DCAF4L1Q3SXM0 396 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms