RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TMEM117Q9H0C3 514 aa9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 DACT1Q9NYF0 836 aa9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 SRPRBQ9Y5M8 271 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 MORC2Q9Y6X9 1032 aaPredicted RBP9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 MYH11P35749 1972 aa9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
CCDC90B-208ENST00000527025 DDHD2O94830 711 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 CSPG5O95196 566 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 RB1P06400 928 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 GTF2F1P35269 517 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 LONP1P36776 959 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 NPTX2P47972 431 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 PEX3P56589 373 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 TFF2Q03403 129 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 TFDP1Q14186 410 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 NT5DC1Q5TFE4 455 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 EEF1DP3Q658K8 133 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 COLGALT1Q8NBJ5 622 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 LINC00301Q8NCQ3 95 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 SLC17A8Q8NDX2 589 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 BCL7CQ8WUZ0 217 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 MRPL38Q96DV4 380 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 AK8Q96MA6 479 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 CCDC43Q96MW1 224 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 SAMD11Q96NU1 681 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 PANK2Q9BZ23 570 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 LMCD1Q9NZU5 365 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 DNAJB4Q9UDY4 337 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 IPPQ9Y573 584 aa9.8□□□□□ -0.84
CCDC90B-208ENST00000527025 NT5C1B-RDH14C9J2C7 533 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 MEFVO15553 781 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 LIG1P18858 919 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 AKAP5P24588 427 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 UBA7P41226 1012 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 NAMPTP43490 491 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 ERVFC1P60507 584 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 DHX8Q14562 1220 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 MCM6Q14566 821 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 FAM187BQ17R55 369 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 ADGRD1Q6QNK2 874 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 ADGRD2Q7Z7M1 963 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 RAD54LQ92698 747 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 KIFAP3Q92845 792 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 NTPCRQ9BSD7 190 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 CCSER1Q9C0I3 900 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 NXF3Q9H4D5 531 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 PDZD7Q9H5P4 517 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 NRDE2Q9H7Z3 1164 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 TBC1D13Q9NVG8 400 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 DAXXQ9UER7 740 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 TRIP11Q15643 1979 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 CNTNAP2Q9UHC6 1331 aa9.79□□□□□ -0.84
CCDC90B-208ENST00000527025 F8W810 466 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 ACKR2O00590 384 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 ABLIM1O14639 778 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 SLC16A4O15374 487 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 FGF18O76093 207 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 ERLIN2O94905 339 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 NPTXRO95502 500 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 BMP15O95972 392 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 IGFBP6P24592 240 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 NUCB2P80303 420 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 DNM1Q05193 864 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 GIT2Q14161 759 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 TCEAL5Q5H9L2 206 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 AXDND1Q5T1B0 1012 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 NOTUMQ6P988 496 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 SHC4Q6S5L8 630 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 KCNT2Q6UVM3 1135 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 DEPTORQ8TB45 409 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 POF1BQ8WVV4 589 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 P2RX5Q93086 422 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 FIZ1Q96SL8 496 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 GAD1Q99259 594 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 C11orf84Q9BUA3 381 aaPredicted RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 NT5C3AQ9H0P0 336 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 PTPRHQ9HD43 1115 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 KLK14Q9P0G3 267 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 INPP5FQ9Y2H2 1132 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 TDRD15B5MCY1 1934 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 TCHHQ07283 1943 aa9.78□□□□□ -0.84
CCDC90B-208ENST00000527025 TCF20Q9UGU0 1960 aaKnown RBP9.77□□□□□ -0.84
CCDC90B-208ENST00000527025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.77□□□□□ -0.85
CCDC90B-208ENST00000527025 ARL5CA6NH57 179 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms