RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 CLASP2O75122 1294 aaKnown RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 NR1I2O75469 434 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 POMCP01189 267 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 PTGDRQ13258 359 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 PPP2R5AQ15172 486 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 AMHR2Q16671 573 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 CDCA2Q69YH5 1023 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 SUSD6Q92537 303 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-209ENST00000525854 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
HIF3A-209ENST00000525854 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 PRR33A8MZF0 331 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 B4GALT5O43286 388 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 DDHD2O94830 711 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-209ENST00000525854 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
HIF3A-209ENST00000525854 NBR1Q14596 966 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 CBX2Q14781 532 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-209ENST00000525854 MAPK6Q16659 721 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 MCTP1Q6DN14 999 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 CES5AQ6NT32 575 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 RNF135Q8IUD6 432 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 BCL7CQ8WUZ0 217 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-209ENST00000525854 GAD1Q99259 594 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 S1PR5Q9H228 398 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 C11orf16Q9NQ32 467 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 HES2Q9Y543 173 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 ARID2Q68CP9 1835 aa12.87□□□□□ -0.35
HIF3A-209ENST00000525854 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 LOC730098B7Z3J9 87 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 H3BQV1 296 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 NRP1O14786 923 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 B4GALT3O60512 393 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 NPTXRO95502 500 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 MLH1P40692 756 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 PRPHP41219 470 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 NAMPTP43490 491 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 EFNA5P52803 228 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 ITIH3Q06033 890 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 PRPF4BQ13523 1007 aaKnown RBP12.86□□□□□ -0.35
HIF3A-209ENST00000525854 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 HERC4Q5GLZ8 1057 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-209ENST00000525854 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 DEPTORQ8TB45 409 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 AUTS2Q8WXX7 1259 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 KIFAP3Q92845 792 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 IFT74Q96LB3 600 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 NECTIN4Q96NY8 510 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 BHMT2Q9H2M3 363 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 FZD8Q9H461 694 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
HIF3A-209ENST00000525854 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
HIF3A-209ENST00000525854 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 DNM3Q9UQ16 869 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
HIF3A-209ENST00000525854 N4BP3O15049 544 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 OR1G1P47890 313 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 SCNN1GP51170 649 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 DSC1Q08554 894 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 PTPN14Q15678 1187 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 DTHD1Q6ZMT9 781 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 BSNDQ8WZ55 320 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ZFP42Q96MM3 310 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ADPGKQ9BRR6 497 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 COLEC11Q9BWP8 271 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
HIF3A-209ENST00000525854 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
HIF3A-209ENST00000525854 PARP2Q9UGN5 583 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 MUTYHQ9UIF7 546 aa12.85□□□□□ -0.35
HIF3A-209ENST00000525854 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ARIH1Q9Y4X5 557 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-209ENST00000525854 ACKR2O00590 384 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms