RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 CACNB3P54284 484 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 ATP8B2P98198 1209 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 KCNAB2Q13303 367 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 MTX1Q13505 466 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 UBE4AQ14139 1066 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 TESK1Q15569 626 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 CAVIN4Q5BKX8 364 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 TSHZ3Q63HK5 1081 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 AACSQ86V21 672 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 ZNF227Q86WZ6 799 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 FAM26EQ8N5C1 309 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 KREMEN2Q8NCW0 462 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 ADAMTS17Q8TE56 1095 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 SSH3Q8TE77 659 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 LPIN2Q92539 896 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 TRMT2BQ96GJ1 504 aaKnown RBP6.29□□□□□ -1.4
SVIP-202ENST00000525670 BORCS6Q96GS4 357 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 VEZTQ9HBM0 779 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
SVIP-202ENST00000525670 ADARB2Q9NS39 739 aaKnown RBP6.29□□□□□ -1.4
SVIP-202ENST00000525670 ZBTB40Q9NUA8 1239 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 MAST2Q6P0Q8 1798 aa6.29□□□□□ -1.4
SVIP-202ENST00000525670 K7ESM1 405 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 SUSD5O60279 629 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 DDAH1O94760 285 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 VIL1P09327 827 aaKnown RBP6.28□□□□□ -1.4
SVIP-202ENST00000525670 FPR2P25090 351 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 PRDX5P30044 214 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 CNR2P34972 360 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 BCL6P41182 706 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 ECI1P42126 302 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
SVIP-202ENST00000525670 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 PRKG1Q13976 671 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 FXNQ16595 210 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 CFAP100Q494V2 611 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 TTC39AQ5SRH9 613 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
SVIP-202ENST00000525670 TMEM169Q96HH4 297 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 SYT3Q9BQG1 590 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 MYOZ2Q9NPC6 264 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 HDAC5Q9UQL6 1122 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 FPGT-TNNI3KV9GXZ4 949 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 TRPM7Q96QT4 1865 aa6.28□□□□□ -1.4
SVIP-202ENST00000525670 MYH2Q9UKX2 1941 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 B2RBV5 119 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 IL1R1P14778 569 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 ETFBP38117 255 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 SLC4A8Q2Y0W8 1093 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 STRIP1Q5VSL9 837 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 KRT26Q7Z3Y9 468 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 FAM126BQ8IXS8 530 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 CNTROBQ8N137 903 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 RCBTB1Q8NDN9 531 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 TDRD7Q8NHU6 1098 aaKnown RBP6.27□□□□□ -1.41
SVIP-202ENST00000525670 DNAJC2Q99543 621 aaKnown RBP6.27□□□□□ -1.41
SVIP-202ENST00000525670 VPS33BQ9H267 617 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 DBNLQ9UJU6 430 aaKnown RBP6.27□□□□□ -1.41
SVIP-202ENST00000525670 ABT1Q9ULW3 272 aaKnown RBP6.27□□□□□ -1.41
SVIP-202ENST00000525670 COA3Q9Y2R0 106 aaPredicted RBP6.27□□□□□ -1.41
SVIP-202ENST00000525670 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
SVIP-202ENST00000525670 TCP10L2B9ZVM9 353 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 HMMRO75330 724 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 CELF2O95319 508 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 MAP4K4O95819 1239 aaPredicted RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 HSPA6P17066 643 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 RPS12P25398 132 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 LTBRP36941 435 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 MCAMP43121 646 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 KCNJ6P48051 423 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 GFRA1P56159 465 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 SF1Q15637 639 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 FAM26FQ5R3K3 315 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 HHIPL2Q6UWX4 724 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 C15orf52Q6ZUT6 534 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 USP50Q70EL3 339 aaPredicted RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 MOB2Q70IA6 237 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 GGNQ86UU5 652 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 PNMA8AQ86V59 439 aaPredicted RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 DZIP1Q86YF9 867 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 AGBL3Q8NEM8 1001 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 OTUD7AQ8TE49 926 aaPredicted RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 DCPSQ96C86 337 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 EAF2Q96CJ1 260 aaPredicted RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 EDC3Q96F86 508 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 GMLQ99445 158 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.26□□□□□ -1.41
SVIP-202ENST00000525670 GNL3LQ9NVN8 582 aaKnown RBP6.26□□□□□ -1.41
SVIP-202ENST00000525670 RAI14Q9P0K7 980 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 HDAC9Q9UKV0 1011 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 AKAP11Q9UKA4 1901 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms