RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RNF4P78317 190 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 DLX2Q07687 328 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-203ENST00000524927 SSRP1Q08945 709 aaKnown RBP8.53□□□□□ -1.04
NEDD8-203ENST00000524927 SPATC1Q76KD6 591 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 UBE3BQ7Z3V4 1068 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 CCDC105Q8IYK2 499 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 DNAJB8Q8NHS0 232 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 KREMEN1Q96MU8 473 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 SPC25Q9HBM1 224 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 BTBD7Q9P203 1132 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 ANKFY1Q9P2R3 1169 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 SALL1Q9NSC2 1324 aa8.53□□□□□ -1.04
NEDD8-203ENST00000524927 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 CDK5RAP2Q96SN8 1893 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 CABYRO75952 493 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 GJB5O95377 273 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 F13BP05160 661 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 IGKV5-2P06315 115 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 ASNSP08243 561 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 CYP7A1P22680 504 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 IFIT5Q13325 482 aaKnown RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 SV2CQ496J9 727 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 ZC3H14Q6PJT7 736 aaKnown RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 SEZ6L2Q6UXD5 910 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 ADAT2Q7Z6V5 191 aaKnown RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 UBALD2Q8IYN6 164 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 PPP1R14AQ96A00 147 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 SAMD11Q96NU1 681 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 PHF7Q9BWX1 381 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-203ENST00000524927 C1GALT1Q9NS00 363 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 FAM184BQ9ULE4 1060 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 CNPY2Q9Y2B0 182 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 ATAD5Q96QE3 1844 aa8.52□□□□□ -1.05
NEDD8-203ENST00000524927 RALGAPA2Q2PPJ7 1873 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 MYO18BQ8IUG5 2567 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 ANKRD34BA5PLL1 514 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 H3BNC9 293 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 AGRPO00253 132 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 TBX10O75333 385 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 DDX58O95786 925 aaKnown RBP8.51□□□□□ -1.05
NEDD8-203ENST00000524927 PMLP29590 882 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 RRP1BQ14684 758 aaKnown RBP8.51□□□□□ -1.05
NEDD8-203ENST00000524927 TCEAL1Q15170 157 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 CAVIN4Q5BKX8 364 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 CC2D1BQ5T0F9 858 aaKnown RBP8.51□□□□□ -1.05
NEDD8-203ENST00000524927 C12orf42Q96LP6 360 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 MOV10L1Q9BXT6 1211 aaKnown RBP8.51□□□□□ -1.05
NEDD8-203ENST00000524927 SIL1Q9H173 461 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 TRPV6Q9H1D0 765 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 UPF3AQ9H1J1 476 aaKnown RBP8.51□□□□□ -1.05
NEDD8-203ENST00000524927 EPN3Q9H201 632 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 MROH8Q9H579 483 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 LRP2BPQ9P2M1 347 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 ZMYM5Q9UJ78 669 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 KIF16BQ96L93 1317 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 IGF2RP11717 2491 aa8.51□□□□□ -1.05
NEDD8-203ENST00000524927 NBEAQ8NFP9 2946 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 B4GALT4O60513 344 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 EPHX1P07099 455 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 FAM87AP0C7U9 286 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 GJA9P57773 515 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 WDR5P61964 334 aaKnown RBP8.5□□□□□ -1.05
NEDD8-203ENST00000524927 NKX3-2P78367 333 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 GCKRQ14397 625 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 SLC10A6Q3KNW5 377 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 LDHAL6AQ6ZMR3 332 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 CATSPERGQ6ZRH7 1159 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 WDR66Q8TBY9 1149 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 ZNF669Q96BR6 464 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-203ENST00000524927 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 FGD4Q96M96 766 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 TBC1D32Q96NH3 1257 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 C17orf80Q9BSJ5 609 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 DUSP23Q9BVJ7 150 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 FTOQ9C0B1 505 aaKnown RBP eCLIP8.5□□□□□ -1.057e-7■■□□□ 13.4
NEDD8-203ENST00000524927 FBXL21Q9UKT6 434 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 DIS3Q9Y2L1 958 aaKnown RBP8.5□□□□□ -1.05
NEDD8-203ENST00000524927 R4GN57 208 aa8.5□□□□□ -1.05
NEDD8-203ENST00000524927 COL4A3Q01955 1670 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 ZNF462Q96JM2 2506 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 DSPP15924 2871 aaKnown RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 LEFTY1O75610 366 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 SUPT20HL2P0C7V6 817 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 HSD3B2P26439 372 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 HYAL1Q12794 435 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 GPM6BQ13491 265 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 SOWAHCQ53LP3 525 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 DTWD2Q8NBA8 298 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 SUMF1Q8NBK3 374 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 THAP3Q8WTV1 239 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms