RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TCTN1Q2MV58 587 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 LRIT3Q3SXY7 679 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 ARSHQ5FYA8 562 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 LRRC55Q6ZSA7 311 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PARP9Q8IXQ6 854 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 TC2NQ8N9U0 490 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 ZNF507Q8TCN5 953 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PCYT2Q99447 389 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 TUBGCP2Q9BSJ2 902 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 KATNAL1Q9BW62 490 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 OSBPL7Q9BZF2 842 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 RNPEPQ9H4A4 650 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 ST6GALNAC4Q9H4F1 302 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 C17orf75Q9HAS0 396 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 JPH1Q9HDC5 661 aaPredicted RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 ANKEF1Q9NU02 776 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 SETD4Q9NVD3 440 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 CXXC1Q9P0U4 656 aaPredicted RBP7.77□□□□□ -1.17
VPS11-201ENST00000524454 SLC9A2Q9UBY0 812 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PYCARDQ9ULZ3 195 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 PAXBP1Q9Y5B6 917 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 SZT2Q5T011 3432 aa7.77□□□□□ -1.17
VPS11-201ENST00000524454 C17orf102A2RUQ5 167 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ZBBXA8MT70 800 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 E9PMD0 336 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 CCNE2O96020 404 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 FGBP02675 491 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 KRT18P05783 430 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 CTSHP09668 335 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 IQCF3P0C7M6 154 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 CKBP12277 381 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 IDEP14735 1019 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 RPL13P26373 211 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 QARSP47897 775 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 STX17P56962 302 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ACTR2P61160 394 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 IGBP1P78318 339 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ENPEPQ07075 957 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 LRMPQ12912 555 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 HSP90AA2PQ14568 343 aaPredicted RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 MAN2A1Q16706 1144 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 HERC4Q5GLZ8 1057 aaPredicted RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 FKBP15Q5T1M5 1219 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ZNF618Q5T7W0 954 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ANKRD40Q6AI12 368 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 RUFY4Q6ZNE9 571 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 NYAP1Q6ZVC0 841 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 C1orf186Q6ZWK4 172 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 LRRC8DQ7L1W4 858 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 TRMT1LQ7Z2T5 733 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 TMCO2Q7Z6W1 182 aaPredicted RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 SESTD1Q86VW0 696 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 TMTC1Q8IUR5 882 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 TMEM139Q8IV31 216 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 C4orf19Q8IY42 314 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 CCAR2Q8N163 923 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 DEFB123Q8N688 67 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 LMBR1Q8WVP7 490 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 TRAPPC12Q8WVT3 735 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 GLG1Q92896 1179 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 ATP6V0A1Q93050 837 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 HVCN1Q96D96 273 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 CNOT6LQ96LI5 555 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 PLIN2Q99541 437 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 DNAJC7Q99615 494 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 BAG1Q99933 345 aaPredicted RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 REEP2Q9BRK0 252 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 LXNQ9BS40 222 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 MKNK1Q9BUB5 465 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 SRRTQ9BXP5 876 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 SEZ6LQ9BYH1 1024 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 KCTD10Q9H3F6 313 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 PARVGQ9HBI0 331 aa7.76□□□□□ -1.17
VPS11-201ENST00000524454 METTL14Q9HCE5 456 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 MYH9P35579 1960 aaKnown RBP7.76□□□□□ -1.17
VPS11-201ENST00000524454 EML1O00423 815 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 CHMP2AO43633 222 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 CALUO43852 315 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 GYPCP04921 128 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 SELPP16109 830 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 HNRNPH3P31942 346 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 GTF2F1P35269 517 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS11-201ENST00000524454 THPOP40225 353 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 RABGGTBP53611 331 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 MCCD1P59942 119 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 PTK7Q13308 1070 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 BFSP2Q13515 415 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 MBTPS1Q14703 1052 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 GPNMBQ14956 572 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 MEA1Q16626 185 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 KNOP1Q1ED39 458 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 TRIM71Q2Q1W2 868 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 RINT1Q6NUQ1 792 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 PSRC1Q6PGN9 363 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 ZNF662Q6ZS27 426 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 DYMQ7RTS9 669 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 MIER3Q7Z3K6 550 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms