RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 THNSL1Q8IYQ7 743 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 SLC39A11Q8N1S5 342 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 KRI1Q8N9T8 703 aaKnown RBP23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 LINC00301Q8NCQ3 95 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 MRPS27Q92552 414 aaKnown RBP23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 CPB2Q96IY4 423 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 ASB2Q96Q27 587 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 EIF2AQ9BY44 585 aaKnown RBP23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 BLOC1S4Q9NUP1 217 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 LARSQ9P2J5 1176 aaKnown RBP23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 CCDC39Q9UFE4 941 aa23.03■■□□□ 1.28
TRAPPC9-215ENST00000524162 MEIS3P2A8K0S8 358 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 H0YCG3 227 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 PLS3P13797 630 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 PLCG1P19174 1290 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 DNAJB1P25685 340 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 MARCKSP29966 332 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 DDIT3P35638 169 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 TXLNAP40222 546 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 SMTNP53814 917 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 PEX3P56589 373 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 SKIV2LQ15477 1246 aaKnown RBP23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 ARSHQ5FYA8 562 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 APBB1IPQ7Z5R6 666 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 RAD54LQ92698 747 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 SYMPKQ92797 1274 aaKnown RBP23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 ADPGKQ9BRR6 497 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 TMEM175Q9BSA9 504 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 TLR9Q9NR96 1032 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 HCSTQ9UBK5 93 aa23.02■■□□□ 1.28
TRAPPC9-215ENST00000524162 F13A1P00488 732 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 ABCD1P33897 745 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 ZNF131P52739 623 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 BCAR1P56945 870 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 KARSQ15046 597 aaKnown RBP23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 DCAF4L1Q3SXM0 396 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 TCEAL5Q5H9L2 206 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 LARP4BQ92615 738 aaKnown RBP23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 PABPC5Q96DU9 382 aaKnown RBP23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 PDZD7Q9H5P4 517 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 NRDE2Q9H7Z3 1164 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 KMT5AQ9NQR1 393 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 PRDM6Q9NQX0 595 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 TNFSF13BQ9Y275 285 aa23.01■■□□□ 1.27
TRAPPC9-215ENST00000524162 TRIP11Q15643 1979 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 ARL5CA6NH57 179 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 FSCN2O14926 492 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 SSBP05455 408 aaKnown RBP eCLIP23■■□□□ 1.27
TRAPPC9-215ENST00000524162 RNASELQ05823 741 aaKnown RBP23■■□□□ 1.27
TRAPPC9-215ENST00000524162 CTC1Q2NKJ3 1217 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 RASSF8Q8NHQ8 419 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 EPSTI1Q96J88 318 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 PLIN2Q99541 437 aa23■■□□□ 1.27
TRAPPC9-215ENST00000524162 NGRNQ9NPE2 291 aaKnown RBP23■■□□□ 1.27
TRAPPC9-215ENST00000524162 CITO14578 2027 aa22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 CCDC169A6NNP5 214 aa22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 SPTLC2O15270 562 aa22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 CEBPZQ03701 1054 aaKnown RBP22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 STK38Q15208 465 aa22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 LRRC15Q8TF66 581 aa22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 CDCA3Q99618 268 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 NXF3Q9H4D5 531 aaKnown RBP22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 UBE2ZQ9H832 354 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC9-215ENST00000524162 NPTXRO95502 500 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 GALTP07902 379 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 DSC1Q08554 894 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 NT5DC1Q5TFE4 455 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 ATF7IP2Q5U623 682 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 CCDC73Q6ZRK6 1079 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 USP49Q70CQ1 688 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 GPBP1Q86WP2 473 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 TMEM161BQ8NDZ6 487 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 TMEM169Q96HH4 297 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 KIFC3Q9BVG8 833 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 MRPL4Q9BYD3 311 aaKnown RBP22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 RNF39Q9H2S5 420 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 PTPRHQ9HD43 1115 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 INPP5FQ9Y2H2 1132 aa22.98■■□□□ 1.27
TRAPPC9-215ENST00000524162 TTLL13PA6NNM8 815 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 ZC3H11AO75152 810 aaKnown RBP eCLIP22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 BRD1O95696 1058 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 ALDH2P05091 517 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 NCKAP1LP55160 1127 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 LEXMQ3ZCV2 418 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 LONRF3Q496Y0 759 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 TAS1R3Q7RTX0 852 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 GSTCDQ8NEC7 633 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 KCNG4Q8TDN1 519 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 IGSF21Q96ID5 467 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 CLIC6Q96NY7 704 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 GAD1Q99259 594 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 ACO2Q99798 780 aaKnown RBP22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 REEP2Q9BRK0 252 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 PARVGQ9HBI0 331 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 POLD4Q9HCU8 107 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 CFAP45Q9UL16 551 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 HES2Q9Y543 173 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 IRAK3Q9Y616 596 aa22.97■■□□□ 1.27
TRAPPC9-215ENST00000524162 MUC3AQ02505 3323 aa22.96■■□□□ 1.27
TRAPPC9-215ENST00000524162 EDN1P05305 212 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms