RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SIPA1L1O43166 1804 aa8.52□□□□□ -1.04
SPIDR-223ENST00000524033 CEP290O15078 2479 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 ZNF233A6NK53 670 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 DNM1LO00429 736 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SEPT4O43236 478 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 FSBPO95073 299 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SERPING1P05155 500 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 PGK2P07205 417 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 CYBAP13498 195 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 PAFAH1B1P43034 410 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MAGEA10P43363 369 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 NAPAP54920 295 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 KCTD2Q14681 263 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 NAB2Q15742 525 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MCTP2Q6DN12 878 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 LRIG3Q6UXM1 1119 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SV2BQ7L1I2 683 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 KCNK18Q7Z418 384 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SPATS2Q86XZ4 545 aaKnown RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 PRPF38AQ8NAV1 312 aaKnown RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 WHAMMQ8TF30 809 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 CASKIN2Q8WXE0 1202 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.057e-7■■■■■ 70.8
SPIDR-223ENST00000524033 HPS3Q969F9 1004 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MKL1Q969V6 931 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 CALML4Q96GE6 196 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MAML3Q96JK9 1138 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 NOX5Q96PH1 765 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 MMP19Q99542 508 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 UBE2OQ9C0C9 1292 aaKnown RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
SPIDR-223ENST00000524033 RIOX1Q9H6W3 641 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 C6orf50Q9HD87 102 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 LOC285556D6RIA3 1793 aa8.52□□□□□ -1.05
SPIDR-223ENST00000524033 KLRF2D3W0D1 207 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 ANKRD65E5RJM6 399 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 EBAG9O00559 213 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 AKR1B10O60218 316 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 ZBED4O75132 1171 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 HEXIM1O94992 359 aaKnown RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 NDUFB10O96000 172 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 GLI1P08151 1106 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 FAM153BP0C7A2 387 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 GNA11P29992 359 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 ECHS1P30084 290 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 COPB2P35606 906 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 COASYQ13057 564 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 PDCLQ13371 301 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 PDIA5Q14554 519 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 LETM2Q2VYF4 491 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 FAM153CQ494X1 144 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 RRAGAQ7L523 313 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 RIOX2Q8IUF8 465 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 TRIM59Q8IWR1 403 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 IFT20Q8IY31 132 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 BCAS4Q8TDM0 211 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 TBCKQ8TEA7 893 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 CEP89Q96ST8 783 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 LRRC27Q9C0I9 530 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 TMBIM4Q9HC24 238 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 PLCB1Q9NQ66 1216 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 FAM207AQ9NSI2 230 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 MTMR4Q9NYA4 1195 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 AIPL1Q9NZN9 384 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 FAM153AQ9UHL3 310 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 ZNF214Q9UL59 606 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 CTDP1Q9Y5B0 961 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-223ENST00000524033 PCDHA2Q9Y5H9 948 aa8.51□□□□□ -1.05
SPIDR-223ENST00000524033 IGKV6D-41A0A0C4DH26 115 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SMCO2A6NFE2 343 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 HMGB1P1B2RPK0 211 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SOX1O00570 391 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SLC37A4O43826 429 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CCNT1O60563 726 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TTLL1O95922 423 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TSPY3P0CV98 308 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TSPY8P0CW00 308 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SNHG28P0DPA3 235 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SKIP12755 728 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 KLRC1P26715 233 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 ANXA13P27216 316 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 TECP42680 631 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 RPIAP49247 311 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 NAP1L1P55209 391 aaKnown RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SH3BP2P78314 561 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 GFPT1Q06210 699 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CDC37Q16543 378 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-223ENST00000524033 SLC18A3Q16572 532 aa8.5□□□□□ -1.05
SPIDR-223ENST00000524033 CALCRLQ16602 461 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms