RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 RSPO4Q2I0M5 234 aaPredicted RBP8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 Q4G0T1 1027 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 ANO5Q75V66 913 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 EXOC8Q8IYI6 725 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 COLGALT2Q8IYK4 626 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 PJA1Q8NG27 643 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 TBCKQ8TEA7 893 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 PRPF31Q8WWY3 499 aaKnown RBP8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 SLC7A3Q8WY07 619 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 ZNF707Q96C28 371 aaPredicted RBP8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 COLEC11Q9BWP8 271 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 C22orf23Q9BZE7 217 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 SLC2A4RGQ9NR83 387 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 MARCH5Q9NX47 278 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 DLL3Q9NYJ7 618 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 VPS54Q9P1Q0 977 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 NUMBLQ9Y6R0 609 aa8.88□□□□□ -0.99
NSMCE2-213ENST00000523824 EPG5Q9HCE0 2579 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CYP3A7-CYP3A51PA0A087WV96 503 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ARL5CA6NH57 179 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ANHXE9PGG2 379 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ASAP2O43150 1006 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 LAMTOR5O43504 91 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 TGM5O43548 720 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 DKC1O60832 514 aaKnown RBP eCLIP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 GABBR2O75899 941 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 C1RP00736 705 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 NCLP19338 710 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SDHBP21912 280 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 FSHRP23945 695 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CYP3A7P24462 503 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 HOXA11P31270 313 aaPredicted RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CLCN6P51797 869 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 STARD6P59095 220 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 DSG1Q02413 1049 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 NCBP1Q09161 790 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SNW1Q13573 536 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 HTR4Q13639 388 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 TSGA10IPQ3SY00 556 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 VARS2Q5ST30 1063 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 UBXN11Q5T124 520 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 PLA2G4FQ68DD2 849 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 Q6ZUG5 572 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 GLYCTKQ8IVS8 523 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SUMF1Q8NBK3 374 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ST13P5Q8NFI4 369 aaPredicted RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 PSPC1Q8WXF1 523 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 BRF1Q92994 677 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 TMEM143Q96AN5 459 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 BORCS6Q96GS4 357 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CEP170P1Q96L14 293 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 YTHDC1Q96MU7 727 aaKnown RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 GAD1Q99259 594 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SLC26A6Q9BXS9 759 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 BCO2Q9BYV7 579 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 MINDY3Q9H8M7 445 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CHST7Q9NS84 486 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 SPATA6Q9NWH7 488 aaPredicted RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ZDHHC7Q9NXF8 308 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 NCDNQ9UBB6 729 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 IPPQ9Y573 584 aa8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 ZFP37Q9Y6Q3 630 aaPredicted RBP8.87□□□□□ -0.99
NSMCE2-213ENST00000523824 CEP250Q9BV73 2442 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 POTEMA6NI47 508 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 LRRN2O75325 713 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 ERLIN2O94905 339 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 TDP2O95551 362 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 CPA1P15085 419 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 GLULP15104 373 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 MLH1P40692 756 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 QARSP47897 775 aaKnown RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 SCNN1GP51170 649 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 NPEPPSP55786 919 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 GPC5P78333 572 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 LILRA6Q6PI73 481 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 POTEGQ6S5H5 508 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 B3GNT9Q6UX72 402 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 RNF168Q8IYW5 571 aaPredicted RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 MAML2Q8IZL2 1156 aaPredicted RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 GPR161Q8N6U8 529 aaKnown RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 ZNF579Q8NAF0 562 aaKnown RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 RNF149Q8NC42 400 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 SMG8Q8ND04 991 aaKnown RBP8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 TCP11Q8WWU5 503 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 ATRIPQ8WXE1 791 aa8.86□□□□□ -0.99
NSMCE2-213ENST00000523824 SECISBP2LQ93073 1101 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms