RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-219ENST00000522387 ADSSP30520 456 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-219ENST00000522387 MBTPS1Q14703 1052 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
PABPC1-219ENST00000522387 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 SLC39A4Q6P5W5 647 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 NME8Q8N427 588 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
PABPC1-219ENST00000522387 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 PIN4Q9Y237 131 aaKnown RBP13.54□□□□□ -0.24
PABPC1-219ENST00000522387 TRPV2Q9Y5S1 764 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
PABPC1-219ENST00000522387 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
PABPC1-219ENST00000522387 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 SYN1P17600 705 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 NR2F2P24468 414 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 EFNA5P52803 228 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CRYBB1P53674 252 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 HAPLN2Q9GZV7 340 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CCDC113Q9H0I3 377 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ST3GAL5Q9UNP4 418 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 HES2Q9Y543 173 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 TLR3O15455 904 aaKnown RBP13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CCNE1P24864 410 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CASP4P49662 377 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ACOT2P49753 483 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ADAM9Q13443 819 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 EEF1DP3Q658K8 133 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 TTI2Q6NXR4 508 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 ARMCX5Q6P1M9 558 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 CEP120Q8N960 986 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-219ENST00000522387 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
PABPC1-219ENST00000522387 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 FZD8Q9H461 694 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 RWDD2AQ9UIY3 292 aa13.53□□□□□ -0.24
PABPC1-219ENST00000522387 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 TSPAN1O60635 241 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 CLTBP09497 229 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 ATP1A3P13637 1013 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 MGAT3Q09327 533 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 AMHR2Q16671 573 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 LRRC8DQ7L1W4 858 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 THNSL1Q8IYQ7 743 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 FAM84AQ96KN4 292 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.24
PABPC1-219ENST00000522387 TMEM206Q9H813 350 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 PADI3Q9ULW8 664 aa13.52□□□□□ -0.24
PABPC1-219ENST00000522387 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 TRIM43BA6NCK2 446 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 ACKR2O00590 384 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 CLDN3O15551 220 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 KIF20AO95235 890 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 MYL5Q02045 173 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 LRMPQ12912 555 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 SCN5AQ14524 2016 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 LPIN1Q14693 890 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 NCAPHQ15003 741 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 TRIM43Q96BQ3 446 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-219ENST00000522387 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
PABPC1-219ENST00000522387 APOL6Q9BWW8 343 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 TMEM134Q9H6X4 195 aa13.52□□□□□ -0.25
PABPC1-219ENST00000522387 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
PABPC1-219ENST00000522387 SIP14410 1827 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 NBNO60934 754 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 NR3C1P04150 777 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 SFPQP23246 707 aaKnown RBP eCLIP13.51□□□□□ -0.25
PABPC1-219ENST00000522387 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-219ENST00000522387 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-219ENST00000522387 ZNF75DP51815 510 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
PABPC1-219ENST00000522387 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 TSG101Q99816 390 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 FAM213AQ9BRX8 229 aa13.51□□□□□ -0.25
PABPC1-219ENST00000522387 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
PABPC1-219ENST00000522387 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms