RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FILIP1LQ4L180 1135 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 SLFN12LQ6IEE8 588 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 XXYLT1Q8NBI6 393 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 RDH13Q8NBN7 331 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 ZBTB45Q96K62 511 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 TUBGCP2Q9BSJ2 902 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 TCHPQ9BT92 498 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 CELF4Q9BZC1 486 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 ANKFY1Q9P2R3 1169 aa23.36■■□□□ 1.33
R3HCC1-208ENST00000522012 GOLGA8IPA6NC78 632 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 LRRC10BA6NIK2 292 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 GOLGA8JA6NMD2 632 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 ERLIN2O94905 339 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 RPLP2P05387 115 aaKnown RBP23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 TPM2P07951 284 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 FGFR4P22455 802 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 THPOP40225 353 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 COPB1P53618 953 aaKnown RBP23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 ATF7IP2Q5U623 682 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 APTXQ7Z2E3 356 aaKnown RBP23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 FAM186BQ8IYM0 893 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 TMEM174Q8WUU8 243 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 SAAL1Q96ER3 474 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 SEZ6LQ9BYH1 1024 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 CDY2AQ9Y6F7 541 aa23.35■■□□□ 1.33
R3HCC1-208ENST00000522012 PES1O00541 588 aaKnown RBP23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 N4BP3O15049 544 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 B4GALT4O60513 344 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 TOM1L1O75674 476 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 CTSHP09668 335 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 EIF4BP23588 611 aaKnown RBP23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 GJA8P48165 433 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 SNX17Q15036 470 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 AMHR2Q16671 573 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 TSHZ1Q6ZSZ6 1077 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 FRMD5Q7Z6J6 570 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 RPAINQ86UA6 219 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 ZSWIM2Q8NEG5 633 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 MKNK1Q9BUB5 465 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 NOC4LQ9BVI4 516 aaKnown RBP23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 ARMCX3Q9UH62 379 aaPredicted RBP23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 TRPV2Q9Y5S1 764 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 STYXL1Q9Y6J8 313 aa23.34■■□□□ 1.33
R3HCC1-208ENST00000522012 CLDN3O15551 220 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 TPM3P06753 285 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 CDK7P50613 346 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 MARSP56192 900 aaKnown RBP23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 CATSPER4Q7RTX7 472 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 ZBTB33Q86T24 672 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 DHX38Q92620 1227 aaKnown RBP23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 MSTO1Q9BUK6 570 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 TMEM106CQ9BVX2 250 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 METTL14Q9HCE5 456 aaKnown RBP23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 CENPFP49454 3210 aa23.33■■□□□ 1.33
R3HCC1-208ENST00000522012 A0A1B0GTH6 734 aa23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 TSPAN1O60635 241 aa23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 HARSP12081 509 aaKnown RBP23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 MNX1P50219 401 aaPredicted RBP23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 NCBP1Q09161 790 aaKnown RBP23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 TMEM40Q8WWA1 233 aa23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 CPB2Q96IY4 423 aa23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 HAPLN2Q9GZV7 340 aa23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 AGO2Q9UKV8 859 aaKnown RBP23.33■■□□□ 1.32
R3HCC1-208ENST00000522012 FRMPD3Q5JV73 1810 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 CNTNAP2Q9UHC6 1331 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 A0A0B4J269 797 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 TULP1O00294 542 aaPredicted RBP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 CHRNA1P02708 482 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 SFPQP23246 707 aaKnown RBP eCLIP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 ATN1P54259 1190 aaPredicted RBP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 MAN2A1Q16706 1144 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 CDR2LQ86X02 465 aaPredicted RBP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 GPD1LQ8N335 351 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 MRFAP1L1Q96HT8 127 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 FAM213AQ9BRX8 229 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 RTN4Q9NQC3 1192 aaKnown RBP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 TNFSF13BQ9Y275 285 aa23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.32■■□□□ 1.32
R3HCC1-208ENST00000522012 KIAA0391O15091 583 aaKnown RBP23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 EXTL3O43909 919 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 SLC34A2O95436 690 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 ARF4P18085 180 aaPredicted RBP23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 NR1I3Q14994 352 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 TRIM71Q2Q1W2 868 aaKnown RBP23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 ZNF568Q3ZCX4 644 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 VWA3BQ502W6 1294 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 EEF1DP3Q658K8 133 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 MPZL3Q6UWV2 235 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 CBWD2Q8IUF1 395 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 TRIM59Q8IWR1 403 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 PTPRHQ9HD43 1115 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 INTS13Q9NVM9 706 aa23.31■■□□□ 1.32
R3HCC1-208ENST00000522012 KAT6AQ92794 2004 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 EVPLQ92817 2033 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 KRT13P13646 458 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 PROZP22891 400 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 MCL1Q07820 350 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 MGAT3Q09327 533 aa23.3■■□□□ 1.32
R3HCC1-208ENST00000522012 PCBP1Q15365 356 aaKnown RBP eCLIP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms