RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ZBTB45Q96K62 511 aaPredicted RBP26.47■■□□□ 1.83
PVT1-212ENST00000521951 TNFSF13BQ9Y275 285 aa26.47■■□□□ 1.83
PVT1-212ENST00000521951 PSMA7O14818 248 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 EEF1DP3Q658K8 133 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 CENPPQ6IPU0 288 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 NOTUMQ6P988 496 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 PDZD7Q9H5P4 517 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 PTPRHQ9HD43 1115 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 CHST12Q9NRB3 414 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 TYW1Q9NV66 732 aaKnown RBP26.46■■□□□ 1.83
PVT1-212ENST00000521951 DACH1Q9UI36 760 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 NR2E3Q9Y5X4 410 aa26.46■■□□□ 1.83
PVT1-212ENST00000521951 PDXKO00764 312 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 MGEA5O60502 916 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 TOM1L1O75674 476 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 CCNE1P24864 410 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 DSC3Q14574 896 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 TCTN1Q2MV58 587 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 NELFBQ8WX92 580 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 P2RX5Q93086 422 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 CTNND2Q9UQB3 1225 aa26.45■■□□□ 1.83
PVT1-212ENST00000521951 ABLIM1O14639 778 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 N4BP3O15049 544 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 ZSCAN20P17040 1043 aaPredicted RBP26.44■■□□□ 1.82
PVT1-212ENST00000521951 PROZP22891 400 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 RGS19P49795 217 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 C11orf57Q6ZUT1 292 aaPredicted RBP26.44■■□□□ 1.82
PVT1-212ENST00000521951 HS2ST1Q7LGA3 356 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 RPUSD2Q8IZ73 545 aaKnown RBP26.44■■□□□ 1.82
PVT1-212ENST00000521951 APBB2Q92870 758 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 TRAF3IP3Q9Y228 551 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 STYXL1Q9Y6J8 313 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 ADSSP30520 456 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 PMS1P54277 932 aaKnown RBP26.44■■□□□ 1.82
PVT1-212ENST00000521951 SNRPFP62306 86 aaKnown RBP26.44■■□□□ 1.82
PVT1-212ENST00000521951 PAK1Q13153 545 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 ZCWPW2Q504Y3 356 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 MPZL3Q6UWV2 235 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 TCHPQ9BT92 498 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 HAPLN2Q9GZV7 340 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 DNAJC25Q9H1X3 360 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 IL23AQ9NPF7 189 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 AGPAT3Q9NRZ7 376 aa26.44■■□□□ 1.82
PVT1-212ENST00000521951 TRIM49BA6NDI0 452 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CLIC2O15247 247 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CLDN3O15551 220 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CAPN15O75808 1086 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 STX17P56962 302 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 FPGSQ05932 587 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 PPIGQ13427 754 aaKnown RBP eCLIP26.43■■□□□ 1.825e-7■■□□□ 12.9
PVT1-212ENST00000521951 ANO6Q4KMQ2 910 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CT47A1Q5JQC4 288 aaPredicted RBP26.43■■□□□ 1.82
PVT1-212ENST00000521951 UBXN11Q5T124 520 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 ANKRD40Q6AI12 368 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 TWF2Q6IBS0 349 aaKnown RBP26.43■■□□□ 1.82
PVT1-212ENST00000521951 SLFN12LQ6IEE8 588 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CNKSR3Q6P9H4 555 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 SLC27A1Q6PCB7 646 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 ZBTB33Q86T24 672 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 RTN4RL1Q86UN2 441 aaPredicted RBP26.43■■□□□ 1.82
PVT1-212ENST00000521951 CCDC51Q96ER9 411 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 ADAM2Q99965 735 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 FTHL17Q9BXU8 183 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CGNQ9P2M7 1197 aaKnown RBP26.43■■□□□ 1.82
PVT1-212ENST00000521951 ANKFY1Q9P2R3 1169 aa26.43■■□□□ 1.82
PVT1-212ENST00000521951 CALUO43852 315 aaPredicted RBP26.42■■□□□ 1.82
PVT1-212ENST00000521951 ACRP10323 421 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 MATR3P43243 847 aaKnown RBP eCLIP26.42■■□□□ 1.824e-7■□□□□ 10.6
PVT1-212ENST00000521951 ZNF568Q3ZCX4 644 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 FAM43BQ6ZT52 329 aaPredicted RBP26.42■■□□□ 1.82
PVT1-212ENST00000521951 GOLGA5Q8TBA6 731 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 POMGNT1Q8WZA1 660 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 MED15Q96RN5 788 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 ADPGKQ9BRR6 497 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 CBWD1Q9BRT8 395 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 EIF2AQ9BY44 585 aaKnown RBP26.42■■□□□ 1.82
PVT1-212ENST00000521951 CDT1Q9H211 546 aa26.42■■□□□ 1.82
PVT1-212ENST00000521951 A0A0B4J269 797 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 PFKMP08237 780 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 GARTP22102 1010 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 ERCC5P28715 1186 aaPredicted RBP26.41■■□□□ 1.82
PVT1-212ENST00000521951 MCL1Q07820 350 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 ARMCX5Q6P1M9 558 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 LRSAM1Q6UWE0 723 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 LINC01599Q8WXQ3 324 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 TSG101Q99816 390 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 LBHD1Q9BQE6 289 aaPredicted RBP26.41■■□□□ 1.82
PVT1-212ENST00000521951 RWDD2AQ9UIY3 292 aa26.41■■□□□ 1.82
PVT1-212ENST00000521951 BICDL2A1A5D9 508 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 NPTXRO95502 500 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 ZNF445P59923 1031 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 LRRC63Q05C16 580 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 NOLC1Q14978 699 aaKnown RBP eCLIP26.4■■□□□ 1.826e-11■■■■□ 21.2
PVT1-212ENST00000521951 TTI2Q6NXR4 508 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 C16orf59Q7L2K0 433 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 C12orf56Q8IXR9 622 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 TSPYL2Q9H2G4 693 aaPredicted RBP26.4■■□□□ 1.82
PVT1-212ENST00000521951 PCIF1Q9H4Z3 704 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 RGS18Q9NS28 235 aa26.4■■□□□ 1.82
PVT1-212ENST00000521951 ENPP3O14638 875 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms