RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 RTL10Q7L3V2 364 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 FRMD5Q7Z6J6 570 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 SMG8Q8ND04 991 aaKnown RBP9.52□□□□□ -0.89
SPARC-204ENST00000521569 ZNF707Q96C28 371 aaPredicted RBP9.52□□□□□ -0.89
SPARC-204ENST00000521569 TM6SF1Q9BZW5 370 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 MINDY3Q9H8M7 445 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 SLC2A4RGQ9NR83 387 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 MARCH5Q9NX47 278 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 ZDHHC7Q9NXF8 308 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 DLGAP2Q9P1A6 1054 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 DDX25Q9UHL0 483 aaKnown RBP9.52□□□□□ -0.89
SPARC-204ENST00000521569 FRYLO94915 3013 aa9.52□□□□□ -0.89
SPARC-204ENST00000521569 CCDC195A0A1B0GUA6 201 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 TMEM150BA6NC51 233 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 ARL5CA6NH57 179 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 NR1I2O75469 434 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 REC8O95072 547 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 TDP2O95551 362 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 URODP06132 367 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 SRFP11831 508 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 CPA1P15085 419 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 TOB2Q14106 344 aaPredicted RBP9.51□□□□□ -0.89
SPARC-204ENST00000521569 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 KSR1Q8IVT5 923 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 ADSSL1Q8N142 457 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 SIX5Q8N196 739 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 SLC44A3Q8N4M1 653 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 GSTCDQ8NEC7 633 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 HAS1Q92839 578 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 GJA10Q969M2 543 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 CEP170P1Q96L14 293 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 NLRP4Q96MN2 994 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 FAM193BQ96PV7 902 aaPredicted RBP9.51□□□□□ -0.89
SPARC-204ENST00000521569 HSD17B14Q9BPX1 270 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 PHF20Q9BVI0 1012 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 NT5C3AQ9H0P0 336 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 CSRNP2Q9H175 543 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 ZSWIM4Q9H7M6 989 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 MAN1C1Q9NR34 630 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 NAP1L2Q9ULW6 460 aaPredicted RBP9.51□□□□□ -0.89
SPARC-204ENST00000521569 INPP5FQ9Y2H2 1132 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 EVPLQ92817 2033 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 CLUHO75153 1309 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 PLXNA3P51805 1871 aa9.51□□□□□ -0.89
SPARC-204ENST00000521569 KRBA1A5PL33 1030 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 SLC37A4O43826 429 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 LMNAP02545 664 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 XRCC6P12956 609 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPARC-204ENST00000521569 LAMP2P13473 410 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 HOXA9P31269 272 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 YWHABP31946 246 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 ID4P47928 161 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 GLUD2P49448 558 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 NPEPPSP55786 919 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 AMHR2Q16671 573 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 TAS1R1Q7RTX1 841 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 NEK8Q86SG6 692 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 SLFN12Q8IYM2 578 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 ZNF579Q8NAF0 562 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 RNF149Q8NC42 400 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 FEZF2Q8TBJ5 459 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 LXNQ9BS40 222 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 WRAP73Q9P2S5 460 aaPredicted RBP9.5□□□□□ -0.89
SPARC-204ENST00000521569 FBXL21Q9UKT6 434 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 IPPQ9Y573 584 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 GTF3C3Q9Y5Q9 886 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 DMXL1Q9Y485 3027 aa9.5□□□□□ -0.89
SPARC-204ENST00000521569 A0A1B0GUA9 196 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 TSPAN1O60635 241 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 DGAT1O75907 488 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 SLITRK3O94933 977 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 HNRNPA1P09651 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPARC-204ENST00000521569 SRGAP2CP0DJJ0 459 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 ITGA4P13612 1032 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 CA8P35219 290 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 ARL2P36404 184 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 AK2P54819 239 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 STARD6P59095 220 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 HTR4Q13639 388 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 EMC2Q15006 297 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 FAM187BQ17R55 369 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 INF2Q27J81 1249 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 USP41Q3LFD5 358 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 ZNF528Q3MIS6 628 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 PLA2G4FQ68DD2 849 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 ZC3H14Q6PJT7 736 aaKnown RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 CPLX2Q6PUV4 134 aaKnown RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 HACE1Q8IYU2 909 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms